#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | C 1 (C) | polymer(polypeptide(L)) [1026 aa] | Spike glycoprotein :SPIKE_SARS2 | |
2 | b | I 1 (J) | polymer(polypeptide(L)) [223 aa] | Fab 15033-7 heavy chain | 455L 456F 484E 485G 486F 488C 489Y 490F 492L 493Q (identity: 100.0 %/90.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7kxj_C_1 identity=90.7% |
queryA 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113 :******************************************************* ************************************: 7kxj_C_1 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIXXXXXXXXXRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113 SecStr : S SEEE SSS SS EEEEEEEE TT EEE --------- EE SSEEEEEEEESS EEEEEEESSSSSS: ExpBur :eeeeeeeebeeeeebebebbebbbbbeeeeeeeeeeebeebbbbbeeebbebebe---------ebbbeebebeebbbbbbbbeebbbbbbbbbeebebe: queryA 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213 :****************************** ************************** ***************************: 7kxj_C_1 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVXXXXXXXXWMESEFRVYSSANNCTFEYVSQPFLMXXXXXXXXXKNLREFVFKNIDGYFKIYSKHTPINLV: 213 SecStr :S EEEEEEETTEEEEEEEEEEE SS EE -------- STTTEEEEEEEEEEEEE --------- EEEEEEEEEETTEEEEEEEEEE S : ExpBur :eebbbbbbeeeebebebbebebbebbbbbe--------eeebeeebbeeeeeeebeeebeebee---------eebbbbbbbbeebebebbbeeeebeee: queryA 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313 :******************************** ***************************************************: 7kxj_C_1 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHXXXXXXXXXXXXXXXXXAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313 SecStr :SS S EEEEEEEEEE EEEEEEE ----------------- EEEEE EEEEEEEEE TTS EEEEEETTSSHHHHHHHHHT SS SEEE: ExpBur :eebeeebbbbeebbebebebebeebbbbbbee-----------------eebbbbebeeeebbbebbeebebeebbbbeeeebbebbbeeeebebeebeb: queryA 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413 :****************************************************************************************************: 7kxj_C_1 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413 SecStr :EEEE SEEEE S GGGGTTT S B STT B EE SS HHHHHHHT SSEEEEESS SSS TTS SEEEEEEEEEEGGGTTTSSTT: ExpBur :ebeebebeeeeebbbbeeeeeebebeebbebeebbbbbbbeeeebeebbbebbebeeeeebeebeebebeeeebeeeebbbbbbbbbbbbeebbebbbbe: queryA 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513 :****************************************************************************************************: 7kxj_C_1 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513 SecStr : SHHHHHT B TT EEEEEEE HHHH TT EEEEEEE SS BT EE SSS SS BTTEE SEEEE TTS TTTSEEEEEEE: ExpBur :eebebbeebbebeeeeebbbbbeebeeebbeeebbeebebbeeeeeebeebeeeeeeebeeeeeeeeeeeeeeebeebbeebebeeeeeeeebbbbbbbb: Contact : bb bbb bbb bb queryA 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613 :****************************************************************************************************: 7kxj_C_1 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613 SecStr :EEE SS SSS TTTTTS SSEEEEEETTEEEEEEEEE TT SEEE TTS EEEEE SSS EEEEE EEEEEE TTT EEEET: ExpBur :bbeeeeeebebbbbeebeebeeeebbebebeeeeeebebeebeeebeeeeeebeeeeeeeebbbbbeeeebbebeebeebbbbbbbbbbeebeebbbbee: queryA 614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713 :******* *************************************** *************************: 7kxj_C_1 614:DVNCTEVXXXXXXXXXXXXXXXXXTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIA: 713 SecStr :T TTT ----------------- S EEEETTEEEETEEEEEEEE SEEEETTEEEE ------------ EEEEEE SS TTEEE: ExpBur :ebebeeb-----------------eeeeebebebbbbbbbeeeeeeeeeebebeeebbbbbee------------eebbbbbeeeeeeeeeeeeeeeeee: queryA 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813 :****************************************************************************************************: 7kxj_C_1 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813 SecStr :EEEEEEEEEEEEEEE EEE HHHHHHSS HHHHHHHGGGTTTTHHHHHHHHHHHHHHHHHHHHHH SSS SS TT GGGTS TTSSS: ExpBur :bbeebebebeebbbbbebbbbebebeebbbeebeebeebbeebeeebeebeeebeebbeebeebbeebbeebeeeeeeeeeeebeebebeebbeeeeeee: queryA 814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913 :*** ********** ************************************** ****** **************: 7kxj_C_1 814:KRSPIEDLLFNKVTXXXXXXXXXXXXXXXXXXXXXXXXXXKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGPALQIPFPMQMAYRFNGIGVTQ: 913 SecStr : HHHHHHHTT -------------------------- TTSEEE SS HHHHHHHHHHHHHHHHHT GGGGSSS HHHHHHHHHHTTT T: ExpBur :ebbebbeebeeebe--------------------------eebbbeeeeeebeeeebbeebbbbbbbbbebbebbeeeebeeeebeebbbebbebbebee: queryA 914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013 :**************************** ******************************************* **************************: 7kxj_C_1 914:NVLYENQKLIANQFNSAIGKIQDSLSSTPSALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLI:1013 SecStr :HHHHHSHHHHHHHHHHHHHHHHHHHHH GGGGHHHHHHHHHHHHHHHHHHHGGG TTSS S HHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :ebbeeeeeebbeebbebbeebbeebeeeeebbbebeebbeebeebbeebeeeeeeeeebebeebeebeeebeeeebeeebeebbebbbebbeebbeebee: queryA 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113 :****************************************************************************************************: 7kxj_C_1 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113 SecStr :HHHHHHHHHHHHHHHHHHHTSS TTTTSSSEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEES EEETTEEEEESSSEEEESSS EEEEETTEEEEE: ExpBur :ebeebeeebeebbebbeebbbbbbeeeebbbeeebbbbbbbbbbebbbbbbbbbeeeeeeebebbebbbeeeebbebeeebbbbeeeebebbeeebeeee: queryA 1114:IITTDNTFVSGNCDVVIGIVNNTV:1137 :************************: 7kxj_C_1 1114:IITTDNTFVSGNCDVVIGIVNNTV:1137 SecStr : GGGEEEES STT TT EE : ExpBur :ebeeeebeeeeebeebeeeeebee: |