[pdbjlvh2]Protein Model on 7ksg_C_1_F

#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7ksg_C_1_F_1

Protein Model on 7ksg_C_1_F_1 (TEMPLATE: 7ksg )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(queryA)	C 1 (C)	polymer(polypeptide(L)) [1056 aa]	Spike glycoprotein :SPIKE_SARS2
2	b		F 1 (F)	polymer(polypeptide(L)) [129 aa]	Nanobody against SARS-CoV-2 glycoprotein	446G 447G 448N 450N 452L 456F 470T 484E 485G 486F 489Y 490F 492L 493Q 494S 498Q (identity: 100.0 %/93.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7ksg_C_1 identity=93.0%

queryA        14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113
                :*********************************************************     **************************************:
7ksg_C_1      14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVXXXXXTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113
SecStr          :             EEEEE S   B  SS    SEEEEEEEEE  SSEEEEEEEE   ----- TT     EE SSEEEEEEEESS  EEEEEEESS SSS:    
ExpBur          :ebeebeeeeeeeeeebebeebbbbbbeeeeeeeeeeebeebbbbbeeebebbebeee-----ebbbebeebebeebbbbbbbbebbbbbbbbbbeebebe:    

queryA       114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213
                :****************************************************************************************************:
7ksg_C_1     114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213
SecStr          :S EEEEE  SSS EEEEE     S  EEEEEE SSSS EEEEEEES S   S  EEEE           SSS  EEEEEEEEEETTEEEEEEEEE   S :    
ExpBur          :eebbbbbbeeebeebbbbebebbebbbbbbeeeeeeeeeeeebebbeeeeeeeeeeeeeeeeeeebeeeeeebeebbbbbbbbeeeebbbbbeeeebeee:    

queryA       214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313
                :**********************************    **************************************************************:
7ksg_C_1     214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSXXXXGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313
SecStr          :SS       BEEEEEE       EEEEEEEEEE ----  TTTS B  SEEEEEEE EEEEEEEEE TTS EEEEE SSSSHHHHHHHHHTSS   SEEE:    
ExpBur          :eebeeeebbbeeeeebebebebeebbbbbbbbbe----eeebeebebbbbbbbbbebeeeebbbebeeebebeebbbbeeeebbebbbeeeeeebeebeb:    

queryA       314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413
                :****************************************************************************************************:
7ksg_C_1     314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413
SecStr          :EEEEE      EEE      SB  HHHHHS S    GGG EEEEE SSB  HHHHHS SS  EEEEESS STTTTT  BSEEEEEEEEE TTHHHHSSTT:    
ExpBur          :ebeeeeeeeeeebeeeeeeeeebebeebbeeeebebbebbeeeebeebebebeebeeeeebeeeeeeebeeeebbeeebbebebbbbbbebebbebbbee:    

queryA       414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513
                :****************************************************************************************************:
7ksg_C_1     414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513
SecStr          :   HHHHHT    TT  EEEEEEE TTT   SS   S EEE   SS   TT           SSS  TT  BTTB  SEEE    TTS GGGS EEEEEE:    
ExpBur          :eebebbeebbebbeebebbbbbbebeeebeeeeeebebebbeebeeebeeeeebeeeeeeeebeeebeeeeeeebeebbeebebeeeeeebebbebbbbb:    
Contact         :                                bbb b b   b             b             bbb  bb bbb   b               

queryA       514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613
                :****************************************************************      ******************************:
7ksg_C_1     514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRXXXXXXILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613
SecStr          :EEE  SS  SB           SS EEEEETTEEEEEEEEE  S   TT  EEE TTS EEEE ------ EEEE    EEEEEEES TTT S  EEEEE:    
ExpBur          :bbeeeeeeeebebbeeeeeeeeeebbebebeebeeebbbeebeeebeeeeeebeeeeeeebbbe------ebebeebeeebbbbbbbbeeebeebbbbee:    

queryA       614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713
                :*******                    **********************************                ***********************:
7ksg_C_1     614:DVNCTEVXXXXXXXXXXXXXXXXXXXXNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYXXXXXXXXXXXXXXXXSIIAYTMSLGAENSVAYSNNSIA: 713
SecStr          :T  TT  -------------------- EEEETTEEEES EE SS    SEEEETTEEEE ----------------  EEEE   S        TT EE:    
ExpBur          :ebebeee--------------------eeeebebbbbeebeeeeeeeebebebeeebbbee----------------ebebbeeeeeeeeeeeeeeeeee:    

queryA       714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813
                :****************************************************************************************************:
7ksg_C_1     714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813
SecStr          :EEEEEEEEEEEEEEE    EEEE HHHHHT S HHHHHHHGGG THHHHHHHHHHHHHHHHHHHHHHHH   SS     SS  STT   TTTS  TT ST:    
ExpBur          :bbbebebebeeebbbbbbebbbbebeebbbeebeebeebbeeeeeebeebeeebeebbebbeebbeebbeebeeebeeeeeeebeebebebbbeeeeeee:    

queryA       814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913
                :***************                          ***********************************************************:
7ksg_C_1     814:KRSFIEDLLFNKVTLXXXXXXXXXXXXXXXXXXXXXXXXXXFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913
SecStr          :T  HHHHHHHHH   --------------------------  SEEEE  SS HHHHHHHHHHHHHHHHHHTTTTSSSS     HHHHHHHHHHHTT  H:    
ExpBur          :ebbebbbbbbeebee--------------------------eebbeeeeeebeeeebbeebebbbbbbbebbeebeeeeeeeeebbebbbebbeebebee:    

queryA       914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013
                :************************************************************************  **************************:
7ksg_C_1     914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLI:1013
SecStr          :HHHHHSHHHHHHHHHHHHHHHHHHHHH  STTHHHHHHHHHHHHHHHHHHHHHT  TTSS S HHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :ebbeeeeeebbebbeebbbebbeebeeeeeebeebeebeeebeebbeebeeeeeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebee:    

queryA      1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113
                :****************************************************************************************************:
7ksg_C_1    1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113
SecStr          :HHHHHHHHHHHHHHHHHHHTSS   STTSSSSSEEEEEEEEE SSEEEEEEEEEEEEEEEEE   S EEETTEEEEESSSEEEESSS EEEEETTEEEEE:    
ExpBur          :bbeebeebbeebbebbeebbbbbbeeeebbbeeebbbbbbbbbeebbbbbbbbbeeeeeeebebbebbbeeeebbebeebbbbbeeeebebbbebbeeee:    

queryA      1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD:1146
                :*********************************:
7ksg_C_1    1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD:1146
SecStr          :E BTTSEEE S SSSSTT EE   B TTHHHH :    
ExpBur          :ebbeebbeeeeebeeeeeeeeeebeeeeeeeee:

Protein Model on 7ksg_C_1_F_1 (TEMPLATE: 7ksg )

Input Residue Numbers for Focused Sites