#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | C 1 (C) | polymer(polypeptide(L)) [1034 aa] | Spike glycoprotein :SPIKE_SARS2 | |
2 | b | EA 1 (e) | branched(oligosaccharide) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 342F 343N 367V 371S 373S (identity: 100.0 %/91.2 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7kml_C_1 identity=91.2% |
queryA 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113 :******************************************************* ************************************: 7kml_C_1 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIXXXXXXXXXRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113 SecStr : B S B EE SS SEEEEEEEEE SS EEEEE --------- B EE SSEEEEEE SS EEEEEEESSSSTT: ExpBur :eebebebeeeeeeeeebebbebbbbeeeeeeeeeeeebeebbbbbebebbbbebe---------ebbbeeeebeebbbbbbbbeeebbebbbbbebbeee: queryA 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213 :****************************** *************************** ***************************: 7kml_C_1 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVXXXXXXXXWMESEFRVYSSANNCTFEYVSQPFLMDXXXXXXXXKNLREFVFKNIDGYFKIYSKHTPINLV: 213 SecStr :SEEEEEEEETTEEEEEEEEEEE SS B -------- BSTTTEEEEEEEEEEEE S SS -------- EEEEEEEEEETTEEEEEEEEEE S: ExpBur :eebbbbbbeeebbebebbebebbebbbbbe--------eeebeebbbeeeeeeebeeeeeebbee--------eebbbbbbbbeeeebebbbebeebeee: queryA 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313 :********************************** *****************************************************: 7kml_C_1 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSXXXXXXXXXXXXXGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313 SecStr :SS S EEEEEEEEE EEEEEE ------------- EEEEEEE EEEEEEEEE TTS EEEEEETTT HHHHHHHHTT S SEEE: ExpBur :eebeeebebbeebbebebebebeebbbbbbeeee-------------eebbbbbbebeebebbbebeeeeebeebbbbeeeebbebbbeeeebebeebee: queryA 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413 :****************************************************************************************************: 7kml_C_1 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413 SecStr :EEEEEE EEEEE GGGGTTT S EESTT B EE SEE TTHHHHH SSEEEEESS SSS TT BSEEEEEEEEEEHHHHHH TT: ExpBur :eeeebebeeeeebebeeeeeeebebeebbebeebbbbbbbeeeebeebebebbebeeeeebeebebeebeeeebbeeebbbbbbbbbbbbbebbeebbbe: Contact : bb b b b queryA 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513 :****************************************************************************************************: 7kml_C_1 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513 SecStr : SHHHHHT B TTSEEEEEEEEGGGTT TT EEEEEEE SS BT EE SSS TT BTTEE SEEEE TTS TTTSEEEEEEE: ExpBur :eeeebbeebbbbbeebebbbbbebbbeebbeeebbeebebbeebeeebeebeeeeeeebeeeeeeebeeeeeeebeebbeebebeeeeeeeebbbbbbbb: queryA 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613 :****************************************************************************************************: 7kml_C_1 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613 SecStr :EEE SS EE SS EEEEETTEEEEEEEEE TT EEE GGG EEEEE SSS EEEEEE EEEEEEEE TTT EEEEE: ExpBur :bbbeeeeeeebbbeeeeeeeeeeebbebebeeeeeebbbeebeeeeeeeeeeeeeeeeebbbbbbbeeeeebeeeebeeebbbbbbbbbeebeebbbbee: queryA 614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713 :******* *************************************** *************************: 7kml_C_1 614:DVNCTEVXXXXXXXXXXXXXXXXXTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIA: 713 SecStr :T TTT ----------------- SSEEE SSEEEES EEEEEEE SEEEETTEEEEEE ------------ EEEEEEE S SSEEE: ExpBur :ebebeee-----------------eeeeeeebebbbbbebeeeeeeeeeebebeeebbbbbee------------eeebbbbeeeeeeeeeeeeeeeeee: queryA 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813 :****************************************************************************************************: 7kml_C_1 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813 SecStr :EE EEEEEEEEEEE EEEE HHHHHHTT HHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH SS SS STT TTTS TTSSS: ExpBur :bbeebebebeebbbbbbbebbebebeebbbeeeeebeebbeeeeeebeebeeebeebbeebbebbeebbeebeeeeeeeeeeebeebebeebbeeeeeee: queryA 814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913 :*** ********** ************************************** ****** **************: 7kml_C_1 814:KRSPIEDLLFNKVTXXXXXXXXXXXXXXXXXXXXXXXXXXKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGPALQIPFPMQMAYRFNGIGVTQ: 913 SecStr : HHHHHHHHH -------------------------- SSEEEE SS HHHHHHHHHHHHHHHHHTGGGGGSSS HHHHHHHHHHTTT T: ExpBur :ebbebbebbbeebe--------------------------eebbbeeeeeebeeeebbeebbbbbbbbbbbbebbeeeebeebebeebbbebbeebebee: queryA 914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013 :**************************** ******************************************* **************************: 7kml_C_1 914:NVLYENQKLIANQFNSAIGKIQDSLSSTPSALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLI:1013 SecStr :HHHHHTHHHHHHHHHHHHHHHHHHHHH GGGGHHHHHHHHHHHHHHHHHHHHHT TTSS S HHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :ebbeebeeebbebbeebbeebbeebeeeeeebeebbebbeebeebbeebeeebeeeeebebeebeebeeebeeeebeebbeebbebbbebbeebbeebee: queryA 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113 :****************************************************************************************************: 7kml_C_1 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113 SecStr :HHHHHHHHHHHHHHHHHHHTSS TTTTSSSEEEEEEEEEETTEEEEEEEEEEES EEEEEE S EEETTEEEEESSSEEEE SS EEEE SSS E: ExpBur :ebeebeeebeebbebbeebbbeebeeeebbbeeebbbbbbbbbbebbbbbbbbbeeeeeeebebbebbbeeeebbeeeeebbbbeeeebbbbbebbbeee: queryA 1114:IITTDNTFVSGNCDVVIGIVNNTVYDP:1140 :***************************: 7kml_C_1 1114:IITTDNTFVSGNCDVVIGIVNNTVYDP:1140 SecStr :E BGGGEEEEEEGGGSTT EE B : ExpBur :ebbeebbeeeeebeebeebeeeebeee: |