#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | C 1 (C) | polymer(polypeptide(L)) [1108 aa] | Spike glycoprotein :SPIKE_SARS2 | |
2 | b | HC 1 (XA) | branched(oligosaccharide) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | 209P 220F 286T (identity: 100.0 %/97.6 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7jjj_C_1 identity=97.6% |
queryA 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113 :****************************************************************************************************: 7jjj_C_1 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113 SecStr : EEEE TT B SS SEEEEEEEEE TT EEEEE TTTT EEE TT EEEEEEESSS EEEEEEESSSSTT: ExpBur :eebebeeeeeeeeeebebeebbbbbeeeeeeeeeeeebeebbbbbebebebbebebeeeeeeeebbbbeebebeebbbbbbbbbbbbbbbbbbbbebeee: queryA 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213 :****************************************************************************************************: 7jjj_C_1 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213 SecStr :S EEEEEEETTEEEEEEEEEEEEEEEEEEEEE SSSS EEEEEEEEEEEEEEEEEEE SS EEEEEEEEEETTEEEEEEEEEE S: ExpBur :eebbbbbeeeebeebebbebebbebbbbbbebbeeeeeeebebebbeeeeeeeeeeeeeeeeebebeeeeeebeebebbbbbeeeeebebbeeeeebebe: Contact : b queryA 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313 :****************************************************************************************************: 7jjj_C_1 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313 SecStr :SS BEEEEEE EEEEEEEEE TTS TTTS B SEEEEEEE EEEEEEEEE TTS EEEEEETTS HHHHHHHHTT S SEEE: ExpBur :eebeeeebbbeeeeebebebebeebbbbbbbbbbeebeeeebebbbbbbbbbbbbebeebebbbebeeebebeebbbbeeebbbebebeeeebebeebee: Contact : b b queryA 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413 :****************************************************************************************************: 7jjj_C_1 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413 SecStr :EE SEEEE B HHHHHS S EEGGG EEEE SEE GGGHHHH SEEEESSS GGGGGG EEEEEEEEEEEEEGGGGGGSSTT: ExpBur :ebeebeeeeeeebbbbeeeeeebebeeebebeebbbbbebeeeebeebbbeeeebeeeeeeeeeebeebeeeebeebbbbebebbbbbbebebbebbeee: queryA 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513 :****************************************************************************************************: 7jjj_C_1 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513 SecStr : SHHHHHT TT SEEEEE TTTS TT TT EEE SS TT EE TT SS BTTEE SEEE TTS GGGSEEEEEEE: ExpBur :eeeebbeebbebbeebebbbbbbebbeebbeeebbeebebbeebeeebeeeeeeeeeebeebeeeebeeeeeebbeebbeebbbbeeeeebebbbbbbbe: queryA 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613 :****************************************************************************************************: 7jjj_C_1 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613 SecStr :EEE SSS SEE S SSEEEEEETTEEEEEEEEE TT B TTS EEE SSS EEEEE S S EEEEE TTT EEEET: ExpBur :bbeeeeeebebbbeeeeeeeeeeebbebbbbbeeeebbbeebeeebeeeebbbeeeeeebbbbbbbeeeebbebeebeeebbbbbbbbeeebeeebbbbe: queryA 614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713 :***** ********************************************* *************************: 7jjj_C_1 614:DVNCTXXXXXXXXXXXXXTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIA: 713 SecStr :T ------------- SSS S EEEETTEEEESSEEEEEEE S BTTEEEEEE ------------ EEEEEEE S TTEEE: ExpBur :ebebe-------------eeebeeeeeeebebebbbbbebeeeeeeeeeebebeeebbbbeee------------eebbbbbeeeeeeeeeeeeeeeeee: queryA 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813 :****************************************************************************************************: 7jjj_C_1 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813 SecStr :E SEEEEEEEEEEEE EEEE TTHHHHTT HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHH S S STT TTTSB TTSSS: ExpBur :bbeebebebeebbbbbbbbbbebebeebbbeebeebeebbeeeeeebeebeeebeebbeebbebbeebbbebeeeeeebeeeebeebebeebbbbeeeeb: queryA 814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913 :****************************************************************************************************: 7jjj_C_1 814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913 SecStr : BHHHHHHHHHS S S GGGGSSGGGGT HHHHHHTTTEEEE SS HHHHHHHHHHHHHHHHHTGGGGSSSS HHHHHHHHHHHHT T: ExpBur :ebbebbbebbeebeeeeeeeeeeeeebeeeebeeeeebbbeeebbeeeeeebeeeebbebbbbbbbbbbebbeebeeeeeeeeebbebbbebbeebebee: queryA 914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013 :************************************************************************ **************************: 7jjj_C_1 914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLI:1013 SecStr :HHHHHTHHHHHHHHHHHHHHHHHHHHH GGGHHHHHHHHHHHHHHHHHHHGGG TTSS S HHHHHHH HHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :ebbeeeeeebbebbeebbeebbeebeeeeeebeebeebbeebeebbeebeeebeeeeebebbebeebeeeeeeeebeebbeebbebbbebbeebbeebee: queryA 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113 :****************************************************************************************************: 7jjj_C_1 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113 SecStr :HHHHHHHHHHHHHHHHHHHTSS TTSSSSSEEEEEEEEEETTEEEEEEEEEEEE EEEEEES EESSSSEEEESSSEEEE SS EEEE TTS B: ExpBur :ebeebeeebeebbebbeebbbbbbeeeeebbeeebbbbbbbbbbebbbbbbbbbeebeeeebeebebbbeeeebbeeeeebbbbeeeebbbbbebbebee: queryA 1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD:1146 :*********************************: 7jjj_C_1 1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD:1146 SecStr : BTTSEEEES TTT TT EE B HHHHH : ExpBur :ebbeeebeeeeebeebeeeeeeebeebeeeeee: |