#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | B 1 (B) | polymer(polypeptide(L)) [1109 aa] | Spike glycoprotein :SPIKE_SARS2 | |
2 | b | GA 1 (g) | branched(oligosaccharide) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 144Y 147K 149N 151S 153M (identity: 100.0 %/97.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7jjj_B_1 identity=97.7% |
queryA 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113 :****************************************************************************************************: 7jjj_B_1 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113 SecStr : EEEE TT EE SSS SEEEEEEEEE TT EEEEEEEE STT EE EEE TT EEEEEEESS EEEEEEESS STT: ExpBur :eebebeebeeeeeeebebeebbbbbbeeeebeeeeeebeeebbbbebebebbbbeeeeeeebebbbbbeebebeebbbbbbbbbbbbbbbbbbbeebeee: queryA 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213 :****************************************************************************************************: 7jjj_B_1 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213 SecStr :S EEEEEEETTEEEEEEE EEEEEEEEE SS EEEEEEE S EEEEE SS EEEEEEEEEETTEEEEEEEEEE : ExpBur :eebbbbbebbebeebebbebebbebbbbbbeeeeeeeebebebeebeeeeeeeeeeeeeeeeebebebeeeebeebebbbbbeeeeebebbbeeeebeee: Contact : b b b b b queryA 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313 :****************************************************************************************************: 7jjj_B_1 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313 SecStr :SS S EEEEEEEE SEEEEEEEEB TTS SSTTTS B SEEEEEEE EEEEEEEEE TTS EEEEEETTS HHHHHHHHTT S SEEE: ExpBur :eebbeeebbbeeeeebebebebeebbbbbbbbbbeebeeeebebbbbbebbbbbbebeebebbbebeeebebeebbbbeeebbbebbbeeeebebeebeb: queryA 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413 :****************************************************************************************************: 7jjj_B_1 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413 SecStr :EE SEEEE B HHHHHS S BGGG EEEE SEE GGGGGGT SEEEESSS GGGGGG EEEEEEEEEEEEEGGGGGGSSTT: ExpBur :ebeebeeeeeeebbbbeebeeebebeebbeeeebbbbbebeeeebeebbbeeeebeeeeeeeeeebeebeeeebeebbbbebebbbbbbebebbebbeee: queryA 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513 :****************************************************************************************************: 7jjj_B_1 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513 SecStr : SHHHHHT TT SEEEEE TTTS TT TT EEE SS TT EE TT SS BTTEE SEEE TTS GGGSEEEEEEE: ExpBur :eeeebbeebbebbeebebbbbbbebeeebbeeebbeebebbebbeeebeeeeeeeeeebeebeeeebeeeeeeebeebeeebebeeeeeebebbbbbbbe: queryA 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613 :****************************************************************************************************: 7jjj_B_1 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613 SecStr :EEE SSS SEE S SSEEEEEETTEEEEEEEEE TT B TTS EEE SSS EEEEE S S EEEEE TTT EEEET: ExpBur :bbeeeeeebebbbeeeeeeeeeeebbebbbbbbeeebbbeebeeebeeeebbbeeeeeebbbbbbbeeeebbebeebeeebbbbbbbbbeebeeebbbbe: queryA 614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713 :***** ********************************************** *************************: 7jjj_B_1 614:DVNCTXXXXXXXXXXXXXTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIA: 713 SecStr :T ------------- SSS S EEEETTEEEES EEEEEEE S BTTEEEEEEE ----------- EEEEEEEE S TTEEE: ExpBur :ebebe-------------eeebeeeeeeeeeeebbbbbebeeeeeeeeeebebeeebbbbeeee-----------eebbbbbeeeeeeeeeeeeeeeebe: queryA 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813 :****************************************************************************************************: 7jjj_B_1 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813 SecStr :E SEEEEEEEEEEEE EEE TTHHHHTT HHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHH SS S STT TTTSB TTSSS: ExpBur :bbeebebebeeebbbbbbbbbebebeebbbeebeebeeebeeeeebbeebeeebeebbeebbebbeebbeebeeeeeeeeeeebeebebebbbbeeeeeb: queryA 814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913 :****************************************************************************************************: 7jjj_B_1 814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913 SecStr : BHHHHHHHHHS S SS GGGG SGGGGT HHHHHHTTTEEE SS HHHHHHHHHHHHHHHHHT TT SSS HHHHHHHHHHHHTS H: ExpBur :ebbebbebbbeebeeeeeeeeeeeeebeeeebeeeebbbbeeebbeeeeeebeeeebbeebbbbbbbbbebbeebbeeeeeebebeebbbebbeebebee: queryA 914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013 :************************************************************************ **************************: 7jjj_B_1 914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLI:1013 SecStr :HHHHHTHHHHHHHHHHHHHHHHHHHHH SGGGHHHHHHHHHHHHHHHHHHHGGG TTSS S HHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :ebbeeebeebbebbeebbeebeeebeeeeeebeebbebbeebeebbeebeeebeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebee: queryA 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113 :****************************************************************************************************: 7jjj_B_1 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113 SecStr :HHHHHHHHHHHHHHHHHHHTSS TTSSSSSEEEEEEEEEETTEEEEEEEEEEEE EEEEEES EESSSSEEEESSSEEEE SS EEEE TTS B: ExpBur :ebeebeebbeebbebbeebbbbbbeeeeebbeeebbbbbbbbbbebbbbbbbbbeebeeeebebbebbbeeeebbeeeeebbbbeeeebbbbbeebeeee: queryA 1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD:1146 :*********************************: 7jjj_B_1 1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD:1146 SecStr : BTTSEEEES TTTSTT EE B TTTTTT : ExpBur :ebbeeebeeeeebeebeebeeeebeeeeeeeee: |