#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7jjj_B_1_FA_1

Protein Model on 7jjj_B_1_FA_1 (TEMPLATE: 7jjj )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) B 1 (B) polymer(polypeptide(L)) [1109 aa] Spike glycoprotein :SPIKE_SARS2
2 b FA 1 (f) branched(oligosaccharide) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 15C 16V 17N 136C 137N (identity: 100.0 %/97.7 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7jjj_B_1 identity=97.7%
queryA        14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113
                :****************************************************************************************************:
7jjj_B_1      14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113
SecStr          :             EEEE TT  EE SSS    SEEEEEEEEE  TT EEEEEEEE   STT   EE   EEE TT EEEEEEESS  EEEEEEESS STT:    
ExpBur          :eebebeebeeeeeeebebeebbbbbbeeeebeeeeeebeeebbbbebebebbbbeeeeeeebebbbbbeebebeebbbbbbbbbbbbbbbbbbbeebeee:    
Contact         : bbb                                                                                                

queryA       114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213
                :****************************************************************************************************:
7jjj_B_1     114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213
SecStr          :S EEEEEEETTEEEEEEE  EEEEEEEEE     SS      EEEEEEE  S EEEEE            SS  EEEEEEEEEETTEEEEEEEEEE    :    
ExpBur          :eebbbbbebbebeebebbebebbebbbbbbeeeeeeeebebebeebeeeeeeeeeeeeeeeeebebebeeeebeebebbbbbeeeeebebbbeeeebeee:    
Contact         :                      bb                                                                            

queryA       214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313
                :****************************************************************************************************:
7jjj_B_1     214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313
SecStr          :SS   S  EEEEEEEE      SEEEEEEEEB  TTS SSTTTS B  SEEEEEEE EEEEEEEEE TTS EEEEEETTS HHHHHHHHTT S   SEEE:    
ExpBur          :eebbeeebbbeeeeebebebebeebbbbbbbbbbeebeeeebebbbbbebbbbbbebeebebbbebeeebebeebbbbeeebbbebbbeeeebebeebeb:    

queryA       314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413
                :****************************************************************************************************:
7jjj_B_1     314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413
SecStr          :EE        SEEEE      B  HHHHHS S   BGGG EEEE  SEE  GGGGGGT   SEEEESSS GGGGGG EEEEEEEEEEEEEGGGGGGSSTT:    
ExpBur          :ebeebeeeeeeebbbbeebeeebebeebbeeeebbbbbebeeeebeebbbeeeebeeeeeeeeeebeebeeeebeebbbbebebbbbbbebebbebbeee:    

queryA       414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513
                :****************************************************************************************************:
7jjj_B_1     414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513
SecStr          :  SHHHHHT    TT  SEEEEE  TTTS  TT  TT EEE   SS   TT        EE TT   SS  BTTEE SEEE    TTS GGGSEEEEEEE:    
ExpBur          :eeeebbeebbebbeebebbbbbbebeeebbeeebbeebebbebbeeebeeeeeeeeeebeebeeeebeeeeeeebeebeeebebeeeeeebebbbbbbbe:    

queryA       514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613
                :****************************************************************************************************:
7jjj_B_1     514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613
SecStr          :EEE SSS  SEE S        SSEEEEEETTEEEEEEEEE      TT  B   TTS   EEE SSS  EEEEE S  S EEEEE  TTT    EEEET:    
ExpBur          :bbeeeeeebebbbeeeeeeeeeeebbebbbbbbeeebbbeebeeebeeeebbbeeeeeebbbbbbbeeeebbebeebeeebbbbbbbbbeebeeebbbbe:    

queryA       614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713
                :*****             **********************************************           *************************:
7jjj_B_1     614:DVNCTXXXXXXXXXXXXXTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIA: 713
SecStr          :T    -------------  SSS   S EEEETTEEEES EEEEEEE   S  BTTEEEEEEE ----------- EEEEEEEE  S        TTEEE:    
ExpBur          :ebebe-------------eeebeeeeeeeeeeebbbbbebeeeeeeeeeebebeeebbbbeeee-----------eebbbbbeeeeeeeeeeeeeeeebe:    

queryA       714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813
                :****************************************************************************************************:
7jjj_B_1     714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813
SecStr          :E SEEEEEEEEEEEE     EEE TTHHHHTT HHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHH   SS     S   STT   TTTSB TTSSS:    
ExpBur          :bbeebebebeeebbbbbbbbbebebeebbbeebeebeeebeeeeebbeebeeebeebbeebbebbeebbeebeeeeeeeeeeebeebebebbbbeeeeeb:    

queryA       814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913
                :****************************************************************************************************:
7jjj_B_1     814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913
SecStr          :  BHHHHHHHHHS  S  SS   GGGG SGGGGT HHHHHHTTTEEE   SS HHHHHHHHHHHHHHHHHT TT SSS      HHHHHHHHHHHHTS H:    
ExpBur          :ebbebbebbbeebeeeeeeeeeeeeebeeeebeeeebbbbeeebbeeeeeebeeeebbeebbbbbbbbbebbeebbeeeeeebebeebbbebbeebebee:    

queryA       914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013
                :************************************************************************  **************************:
7jjj_B_1     914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLI:1013
SecStr          :HHHHHTHHHHHHHHHHHHHHHHHHHHH SGGGHHHHHHHHHHHHHHHHHHHGGG  TTSS S HHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :ebbeeebeebbebbeebbeebeeebeeeeeebeebbebbeebeebbeebeeebeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebee:    

queryA      1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113
                :****************************************************************************************************:
7jjj_B_1    1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113
SecStr          :HHHHHHHHHHHHHHHHHHHTSS    TTSSSSSEEEEEEEEEETTEEEEEEEEEEEE  EEEEEES EESSSSEEEESSSEEEE SS EEEE TTS   B:    
ExpBur          :ebeebeebbeebbebbeebbbbbbeeeeebbeeebbbbbbbbbbebbbbbbbbbeebeeeebebbebbbeeeebbeeeeebbbbeeeebbbbbeebeeee:    

queryA      1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD:1146
                :*********************************:
7jjj_B_1    1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD:1146
SecStr          :  BTTSEEEES TTTSTT EE   B TTTTTT :    
ExpBur          :ebbeeebeeeeebeebeebeeeebeeeeeeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123