#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | I 1 (I) | polymer(polypeptide(L)) [1006 aa] | Spike glycoprotein :SPIKE_SARS2 | |
2 | b | CB 1 (2) | branched(oligosaccharide) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 342F 343N (identity: 100.0 %/89.6 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7dwx_I_1 identity=89.6% |
queryA 27:AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNV: 126 :***************************************** **********************************************: 7dwx_I_1 27:AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAXXXXXXXXXXXXXNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNV: 126 SecStr : EEE SS B SS S EEEEEEE SS EEEEE ------------- EE SS EEE BB SS B BEESSSSSSS EEEEEE SS E: ExpBur :eeeebeebbbbbbeeeeeeeeeeebeeebbbbeeebeebee-------------eeebebeebbbbbbbeeeeeebbbbbbeebeeeeebbbbbeeeeee: queryA 127:VIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPL: 226 :***************** ******************** ****************************************: 7dwx_I_1 127:VIKVCEFQFCNDPFLGVXXXXXXXXXMESEFRVYSSANNCTFEYVSXXXXXXXXXXXXXXKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPL: 226 SecStr :EEEEEEEEE SS B --------- SEEEEEEEEEE -------------- EEEEEEEEETTEEEEEEEEE SSSSS BEEE: ExpBur :bbbbbebebeeebebbe---------eeeeeebeeeeeeeeeeeee--------------eebebbbbbeeeeebbbbbbeeebeeeeebeeeeebbeee: queryA 227:VDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESI: 326 :********************* ***************************************************************: 7dwx_I_1 227:VDLPIGINITRFQTLLALHRSXXXXXXXXXXXXXXXXAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESI: 326 SecStr :EEEE SEE BB ---------------- EEEEE EEEEEEEEE SSS EEEEEETTSSHHHHHHHHHTSS EEEEEEEE B BS : ExpBur :eebeeebebeebbbbbbeeee----------------bbbbbebeeeebbbebeeebebeebbbbeeeebbebbbeeeebebeebebebeebeeeeeeeb: queryA 327:VRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLP: 426 :****************************************************************************************************: 7dwx_I_1 327:VRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLP: 426 SecStr : S TTTSS SS SSS EEE SS HHHHHT S SEEEESSS STTSSS S EEEEEEEE STTGGGSSBT SHHHHHT B : ExpBur :bbbeeeeeebebeebbeeeebbbbbbbeeeebeebbbebeebeeeeeeeebebeebebeebeeebbeebebbbbbbebebbebbbeeeeeebbbbbbebb: Contact : bb queryA 427:DDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCG: 526 :****************************************************************************************************: 7dwx_I_1 427:DDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCG: 526 SecStr :TT SEEEEEE HHHH TT EEEEEEE SS TT EE SSS TT BTTEE SEEEEEE SS TTSS EEEEEEE S S S: ExpBur :eebebbbbbbebeeebbeeebbeebebbbebeeebeeeeebeeeeeeeeeeeebeeeeeeebeebbeebebeeeeeeeebbbbbbbbbbeeeebeebbbb: queryA 527:PKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPVAIHA: 626 :*********************************************************************************************** : 7dwx_I_1 527:PKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPXXXXX: 626 SecStr :S SS EEEEETTEEEEEEEEE TT EE TTS EEEEE TTT EEEEE B EEEEEEETTT EEEETT TTS -----: ExpBur :ebeeeeebeeebbebbbbebeeebbbeeeeeebeeeebbeeeeeeeebbbbbeeeeebbebeeeeebbbbbbbbbbeebeebbbbbeebebeebe-----: queryA 627:DQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEI: 726 : ************************************* *************************************: 7dwx_I_1 627:XXXXXXXXXXXXXSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXXQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEI: 726 SecStr :------------- EEEETTEEEES EE S SEEEETTEEEES ------------- EEEE TTEEEEEEEEEEEEEEEE: ExpBur :-------------eeebebeebbbeebeebeeeeeeebebeeebbbbeee-------------eebbbbeeeeeeeeeeeeeeeeeebbeebebebeeeb: queryA 727:LPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKV: 826 :****************************************************************************************************: 7dwx_I_1 727:LPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKV: 826 SecStr :EE EEEE HHHHHT S SHHHHHHGGG SHHHHHHHHHHHHHHHHHHHHHHHH SS SS STT TTTS SSSSS HHHHHHTTT : ExpBur :bbbbbebbebebeebbbeebeebeebbeeeeeebeebeeebeebbebbeebbeebbeebeeebeeeeeeebeebebeebbeeeeeebebbebbbbbbeee: queryA 827:TLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQ: 926 : *************************************************************************: 7dwx_I_1 827:XXXXXXXXXXXXXXXXXXXXXXXXXXXKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQ: 926 SecStr :--------------------------- SSEEEE SS HHHHHHHHHHHHHHHHHHTTSTTTSS HHHHHHHHHHHTT THHHHTTHHHHHHH: ExpBur :---------------------------eeebbeeeeeebeeeebbeebebbbbbbbebbeebeeeeeeebebbebbbebbeebebeeebbeeeeeebbee: queryA 927:FNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAA:1026 :************* ****************************************** ***************************************: 7dwx_I_1 927:FNSAIGKIQDSLSXXXXALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAA:1026 SecStr :HHHHHHHHHHHH ---- THHHHHHHHHHHHHHHHHHHTTS SSSS SSTTTTTTSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :beebbeebbeebe----ebeebeebeeebeebeeebeeebeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebeebbeebeebbeebb: queryA 1027:TKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNC:1126 :****************************************************************************************************: 7dwx_I_1 1027:TKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNC:1126 SecStr :HHHHHHTSS STTSSSSSEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEES EEETTEEEEESSSEEEESSS EEEE SSS B BTTTEEE S T: ExpBur :ebbeebbbebbeeeebbeeeebbbbbbbbbeebbbbbbbbbeebeeeebebbebbbeeeebbeeeebebbbeeeebebbbeebeeeeebbeeebeeeeeb: queryA 1127:DVVIGIVNNTVYDPLQPELD:1146 :********************: 7dwx_I_1 1127:DVVIGIVNNTVYDPLQPELD:1146 SecStr :TSSTT EE B SHHHH : ExpBur :eeeeeeeeeebeeeeeeeee: |