#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7dwx_I_1_CB_1

Protein Model on 7dwx_I_1_CB_1 (TEMPLATE: 7dwx )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) I 1 (I) polymer(polypeptide(L)) [1006 aa] Spike glycoprotein :SPIKE_SARS2
2 b CB 1 (2) branched(oligosaccharide) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 342F 343N (identity: 100.0 %/89.6 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7dwx_I_1 identity=89.6%
queryA        27:AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNV: 126
                :*****************************************             **********************************************:
7dwx_I_1      27:AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAXXXXXXXXXXXXXNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNV: 126
SecStr          : EEE SS   B  SS    S  EEEEEEE  SS EEEEE  -------------   EE SS EEE BB SS  B   BEESSSSSSS EEEEEE SS E:    
ExpBur          :eeeebeebbbbbbeeeeeeeeeeebeeebbbbeeebeebee-------------eeebebeebbbbbbbeeeeeebbbbbbeebeeeeebbbbbeeeeee:    

queryA       127:VIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPL: 226
                :*****************         ********************              ****************************************:
7dwx_I_1     127:VIKVCEFQFCNDPFLGVXXXXXXXXXMESEFRVYSSANNCTFEYVSXXXXXXXXXXXXXXKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPL: 226
SecStr          :EEEEEEEEE SS  B  ---------      SEEEEEEEEEE   --------------  EEEEEEEEETTEEEEEEEEE  SSSSS       BEEE:    
ExpBur          :bbbbbebebeeebebbe---------eeeeeebeeeeeeeeeeeee--------------eebebbbbbeeeeebbbbbbeeebeeeeebeeeeebbeee:    

queryA       227:VDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESI: 326
                :*********************                ***************************************************************:
7dwx_I_1     227:VDLPIGINITRFQTLLALHRSXXXXXXXXXXXXXXXXAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESI: 326
SecStr          :EEEE     SEE   BB    ---------------- EEEEE EEEEEEEEE SSS EEEEEETTSSHHHHHHHHHTSS  EEEEEEEE  B   BS  :    
ExpBur          :eebeeebebeebbbbbbeeee----------------bbbbbebeeeebbbebeeebebeebbbbeeeebbebbbeeeebebeebebebeebeeeeeeeb:    

queryA       327:VRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLP: 426
                :****************************************************************************************************:
7dwx_I_1     327:VRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLP: 426
SecStr          :       S    TTTSS SS   SSS   EEE SS   HHHHHT S  SEEEESSS STTSSS   S EEEEEEEE STTGGGSSBT  SHHHHHT  B :    
ExpBur          :bbbeeeeeebebeebbeeeebbbbbbbeeeebeebbbebeebeeeeeeeebebeebebeebeeebbeebebbbbbbebebbebbbeeeeeebbbbbbebb:    
Contact         :               bb                                                                                   

queryA       427:DDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCG: 526
                :****************************************************************************************************:
7dwx_I_1     427:DDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCG: 526
SecStr          :TT  SEEEEEE HHHH  TT EEEEEEE   SS   TT        EE SSS  TT  BTTEE SEEEEEE SS  TTSS EEEEEEE   S  S    S:    
ExpBur          :eebebbbbbbebeeebbeeebbeebebbbebeeebeeeeebeeeeeeeeeeeebeeeeeeebeebbeebebeeeeeeeebbbbbbbbbbeeeebeebbbb:    

queryA       527:PKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPVAIHA: 626
                :***********************************************************************************************     :
7dwx_I_1     527:PKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPXXXXX: 626
SecStr          :S        SS EEEEETTEEEEEEEEE      TT   EE TTS EEEEE TTT  EEEEE   B  EEEEEEETTT    EEEETT  TTS  -----:    
ExpBur          :ebeeeeebeeebbebbbbebeeebbbeeeeeebeeeebbeeeeeeeebbbbbeeeeebbebeeeeebbbbbbbbbbeebeebbbbbeebebeebe-----:    

queryA       627:DQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEI: 726
                :             *************************************             *************************************:
7dwx_I_1     627:XXXXXXXXXXXXXSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXXQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEI: 726
SecStr          :-------------  EEEETTEEEES EE S     SEEEETTEEEES  -------------   EEEE            TTEEEEEEEEEEEEEEEE:    
ExpBur          :-------------eeebebeebbbeebeebeeeeeeebebeeebbbbeee-------------eebbbbeeeeeeeeeeeeeeeeeebbeebebebeeeb:    

queryA       727:LPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKV: 826
                :****************************************************************************************************:
7dwx_I_1     727:LPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKV: 826
SecStr          :EE    EEEE HHHHHT S SHHHHHHGGG SHHHHHHHHHHHHHHHHHHHHHHHH   SS     SS  STT   TTTS  SSSSS   HHHHHHTTT :    
ExpBur          :bbbbbebbebebeebbbeebeebeebbeeeeeebeebeeebeebbebbeebbeebbeebeeebeeeeeeebeebebeebbeeeeeebebbebbbbbbeee:    

queryA       827:TLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQ: 926
                :                           *************************************************************************:
7dwx_I_1     827:XXXXXXXXXXXXXXXXXXXXXXXXXXXKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQ: 926
SecStr          :---------------------------  SSEEEE  SS HHHHHHHHHHHHHHHHHHTTSTTTSS     HHHHHHHHHHHTT  THHHHTTHHHHHHH:    
ExpBur          :---------------------------eeebbeeeeeebeeeebbeebebbbbbbbebbeebeeeeeeebebbebbbebbeebebeeebbeeeeeebbee:    

queryA       927:FNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAA:1026
                :*************    ******************************************  ***************************************:
7dwx_I_1     927:FNSAIGKIQDSLSXXXXALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAA:1026
SecStr          :HHHHHHHHHHHH ---- THHHHHHHHHHHHHHHHHHHTTS  SSSS SSTTTTTTSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :beebbeebbeebe----ebeebeebeeebeebeeebeeebeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebeebbeebeebbeebb:    

queryA      1027:TKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNC:1126
                :****************************************************************************************************:
7dwx_I_1    1027:TKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNC:1126
SecStr          :HHHHHHTSS   STTSSSSSEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEES EEETTEEEEESSSEEEESSS EEEE SSS   B  BTTTEEE S T:    
ExpBur          :ebbeebbbebbeeeebbeeeebbbbbbbbbeebbbbbbbbbeebeeeebebbebbbeeeebbeeeebebbbeeeebebbbeebeeeeebbeeebeeeeeb:    

queryA      1127:DVVIGIVNNTVYDPLQPELD:1146
                :********************:
7dwx_I_1    1127:DVVIGIVNNTVYDPLQPELD:1146
SecStr          :TSSTT EE   B SHHHH  :    
ExpBur          :eeeeeeeeeebeeeeeeeee:    


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