#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | I 1 (C) | polymer(polypeptide(L)) [1060 aa] | Spike glycoprotein :SPIKE_SARS2 | |
2 | b | A 1 (e) | polymer(polypeptide(L)) [18 aa] | The heavy chain fragment of 2H2 Fab | 484E 486F (identity: 100.0 %/93.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7dk7_I_1 identity=93.3% |
queryA 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113 :******************************************************** ************************************: 7dk7_I_1 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHXXXXXXXXRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113 SecStr : S EEE SS B SSS SSEEEEEEEE TT EEE EEEE -------- B EE SS EEEEEEESS EEEEEEESSSSTT: ExpBur :eeeebeeeeebeeeebebebbbbbbbeeeeeeeeeeeeeebbbbbebebbebbbee--------ebbbeebebeebbbbbbbbbbebbbbbbbbeebbee: queryA 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213 :****************************************************************************************************: 7dk7_I_1 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213 SecStr :S EEEEEE SS EEEEEE B SS EEEE SSSS TT EE SBS S EEEE SSEEEEEEEEEEEETTEEEEEEEEEEEEES: ExpBur :ebbbbbbbebeeebbebbbbebeebbbbbbeeeeeebeeebeeeebeeeeeeeeeeeebeeeebebeeeeeebeebebbbbbbeebebebbeeeeebebe: queryA 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313 :********************************** ***********************************************************: 7dk7_I_1 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSXXXXXXXSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313 SecStr :SSS BEEEEEEE S EEEEEEEEEE ------- B EEEE EEE EEEEEEEEB TTS B BTTS TTTHHHHHHT SS SEEE: ExpBur :ebbbeeebbbeeeeebebebebeebbbbbbbbee-------eeebebbbbbbbbbebeeeebbbebbeebebeebbbbeeeeebebebeeeeeebeebee: queryA 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413 :****************************************************************************************************: 7dk7_I_1 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413 SecStr :EEEEE SS S TTTTTTT S SSS EEEEE SS SHHHHSSS EEEESSS TTGGGG BSEEEEEEEEE SGGGGG STT: ExpBur :ebeebeeeeeeebebbbeeeeeeebeeeeeeeebebbbbbeeeebeeebbbebebeeeeebeeeeebebeeeebeeebbbbbbbbbbbbebebbeebbee: queryA 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513 :****************************************************************************************************: 7dk7_I_1 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513 SecStr : HHHHHT TT EEEEEE TTTT TT EE S SS TT S S SSSS SSS SS SSEE TTS TTTS EEEEEE: ExpBur :eebebeeebbebbeebebbbbbbebbeebbeeebbeebbbbeebeeebeeeeebeeeeeeeeeeeeeeeeeeeebebebeebebeeeeeebebbbbbbbb: Contact : b b queryA 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613 :****************************************************************************************************: 7dk7_I_1 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613 SecStr :EEE SS B S S EEEE SS EEEEEEE TT S B TTS B EE SSSS EEEEE EEEEEEE TTT EEEEE: ExpBur :bbbeeeeebbbbbbbeeeeeeeeebbebebbbeeeebbbeeeeeeeeeeeeebeeeeeeebbbebbbeeeebbbeeeeebbbbbbbbbeeebeeebbbee: queryA 614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713 :******* ************************************ *************************: 7dk7_I_1 614:DVNCTEVXXXXXXXXXXXXXXXXXXXXNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIA: 713 SecStr :T GGG -------------------- EEE SSEEEESSEE SS B SEEEETTEEEEEE ------------ EEEEEEB TT EE: ExpBur :ebeeeee--------------------eeeebebbbbeebeebeeeeeeebebeeebbbbeee------------eeebbbbeeeeeeeeeeeeeeeeee: queryA 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813 :************************************************************************************************** *: 7dk7_I_1 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKXS: 813 SecStr :E EEEEEEEEEEE EE HHHHHSSS HHHHHHHSTTTTHHHHHHHHHHHHHHHHHHHHHHHTS SS S SSS TTTS S - : ExpBur :bbeebebebeeebbbbbbebeebebeebbbeeeeebeebbeeeeeebeebbeebeebbeebbebbeebbeebeeebeeeeeeebbebebebbbbeeee-e: queryA 814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913 :************** ************************************************************: 7dk7_I_1 814:KRSFIEDLLFNKVTXXXXXXXXXXXXXXXXXXXXXXXXXXKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913 SecStr : HHHHHHHHS -------------------------- SS EE SS HHHHHHHHHHHHHHHHHTTTHHHHSS HHHHHHHHHHTTT T: ExpBur :eebebbebbeeebe--------------------------eeeebeeeeeebeeeebbeebbbbbbbbbebbebbeeeeeeeeebeebbbebbeebebbe: queryA 914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013 :************************************************************************ **************************: 7dk7_I_1 914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLI:1013 SecStr :HHHHHTHHHHHHHHHHHHHHHHHHHHH SGGGHHHHHHHHHHHHHHHHHHHTTT TTSS S SHHHHTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :ebbeeeeeebbebbeebbeebeeebeeeeeebeebeebbeebeebbeebeeeeeeeeebeebebeebeeebeeeebeeebeebbebbbebbeebbeebee: queryA 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113 :****************************************************************************************************: 7dk7_I_1 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113 SecStr :HHHHHHHHHHHHHHHHHHTTTS TTTSSSSEEEEEEEEEETTEEEEEEEEEEE EEE S EESSSSEEEESS EEEE SS EEEE SSS B: ExpBur :ebeebeeebeebbebbeebbbbebeeeebbbeeebbbbbbbbbbebbbbbbbbbeeeeeeebebbebbbeeeebbebeebbbbbeeeebbbbbebbbbee: queryA 1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS:1147 :**********************************: 7dk7_I_1 1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS:1147 SecStr : BTTTEEE S SSSSTT EE B THHHHHH : ExpBur :ebbeeebeeeeebeeeeeeeeeebeeeeeeeeee: |