[pdbjlvh2]Protein Model on 7dk7_D_1_G

#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7dk7_D_1_G_1

Protein Model on 7dk7_D_1_G_1 (TEMPLATE: 7dk7 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(queryA)	D 1 (B)	polymer(polypeptide(L)) [1060 aa]	Spike glycoprotein :SPIKE_SARS2
2	b		G 1 (c)	polymer(polypeptide(L)) [214 aa]	The heavy chain fragment of 2H2 Fab	445V 446G 447G 449Y 483V 484E 485G 486F 488C 489Y 490F 492L 493Q 494S (identity: 100.0 %/93.3 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7dk7_D_1 identity=93.3%

queryA        14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113
                :********************************************************        ************************************:
7dk7_D_1      14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHXXXXXXXXRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113
SecStr          :             EEEEESS  EE SSS   SSSEEEEEEEE  TTEEEEEEEEE -------- B    EE SS EEEEEEESS     EEEESSSSTT:    
ExpBur          :eeeebeeeeebeeeebebebbbbbebeeeeeeeeebebeebbbbbeeebbebbbee--------ebbbeebebeebbbbbbbbbbbbbbbbbbbeebbee:    

queryA       114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213
                :****************************************************************************************************:
7dk7_D_1     114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213
SecStr          :S EEEEEE SS EEEEEE   B SS EEEEE SSSS TT EEEE SBS   S  EEEE            SSEEEEEEEEEEEETTEEEEEEEEEEEEES:    
ExpBur          :eebbbbbbebeeeebebbebebeebbbbbbeebeeeeeeebeeebbeeeeeeeeeeeeeeeeebebeeeeeebeebbbbbbbeeebebebbeeeeeeebe:    

queryA       214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313
                :**********************************       ***********************************************************:
7dk7_D_1     214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSXXXXXXXSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313
SecStr          :SSS     EEEEEEEEE      EEEE EEEEE -------    EE EEEEEEEE EEEEEEEEE SSS EEEEEETTT HHHHHHHHHTSS   SEEE:    
ExpBur          :eebbeeebbbeeebebebebebeebbbbbbbbee-------eeebebbbbbbbbbebeeeebbbebbeebebeebbbbeeeebbebbbeeeeeebeebee:    

queryA       314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413
                :****************************************************************************************************:
7dk7_D_1     314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413
SecStr          :EEEEEE    S     S    B THHHHHT S  B SSS EEEEE SSB  TTTTTTS   SEEEESSS TTTTTS EESEEEEEEEEE SGGGSS STT:    
ExpBur          :eeeebeeeeeeebbbbeeeeeebebeebbeeeebebbbebeeeebeebbbebeeeeeeeeeeeeebbeeebeebbeeebbbbbbbbbbbbbebeeebbee:    

queryA       414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513
                :****************************************************************************************************:
7dk7_D_1     414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513
SecStr          :  SHHHHTT    TT  SEEEEEE TTTT  TT B   EEE   SS   SS          SSSS   SS  SS   SEEE  B TT  TTTS EEEEEE:    
ExpBur          :eeeebbbebbbbbeebebbbbbeebbeebbeeebbeebebbeeeeeebeeeeebeeeebbeeeeeeeeeeeeeebeebbeebbbeeeeeebebbbbbbbb:    
Contact         :                               bbb b                                 bbbb bbb bbb                   

queryA       514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613
                :****************************************************************************************************:
7dk7_D_1     514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613
SecStr          :EEE  SS   EE          SSEEEEE SS EEEEEEE       TT S  B TTS B  B  SSS   BEEE   EEEEEEEE  TTT    EEEEE:    
ExpBur          :bbeeeeeeeebebbeeeeeebeeebbebebeebeeebbbbeeeeebeeeeeebeeeeeeebbbbbbeeeeebbbeebeebbbbbbbbbeeebeeebebbe:    

queryA       614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713
                :*******                    ************************************            *************************:
7dk7_D_1     614:DVNCTEVXXXXXXXXXXXXXXXXXXXXNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIA: 713
SecStr          :T  TT  -------------------- EEE SSEEEES EE SS B  SEEEETTEEEEEE ------------  EEEEEEB           TT EE:    
ExpBur          :ebeeeee--------------------eeeebebbbbeebeeeeeeeeeebebeeebbbbbee------------eeebbbbeeeeeeeeeeeeeeeeee:    

queryA       714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813
                :************************************************************************************************** *:
7dk7_D_1     714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKXS: 813
SecStr          :EEEEEEEEEEEEEEE     EEE HHHHHSTT SHHHHHHGGG SHHHHHHHHHHHHHHHHHHHHHHHT   SS     S   SSS   TTTS  S  - :    
ExpBur          :bbeebebebbebbbbbbbebbbbebeebbbeebeebeebbeeeeeebeebeeebeebbeebbebbeebbeebeeeeeeeeeeebeebebeebebeeee-e:    

queryA       814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913
                :**************                          ************************************************************:
7dk7_D_1     814:KRSFIEDLLFNKVTXXXXXXXXXXXXXXXXXXXXXXXXXXKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913
SecStr          :   HHHHHHHHH  --------------------------  SSEEE   SS HHHHHHHHHHHHHHHHTTTTHHHHSS     HHHHHHHHHHTTT  T:    
ExpBur          :eebebbebbbeebe--------------------------eeebbeeeeeebeeeebbeebbbbbbbbbebbebbeeeeeeeeebeebbbebbebbbbbe:    

queryA       914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013
                :************************************************************************  **************************:
7dk7_D_1     914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLI:1013
SecStr          :HHHHHTHHHHHHHHHHHHHHHHHHHTT SGGGHHHHHHHHHHHHHHHHHHHGGG  TTSS S SHHHHTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :ebbeeeeeebbeebeebbeebbeebeeeeeebeebeebeeebeebbeebeeebeeeeebebeebeebeeebeeeebeebbeebbebbbebbeebbeebee:    

queryA      1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113
                :****************************************************************************************************:
7dk7_D_1    1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113
SecStr          :HHHHHHHHHHHHHHHHHHTTSS    TTSSSSSEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEES EESSSSEEEESSSEEEE SSSEEEE SSS   B:    
ExpBur          :ebeebeebbeebbebbeebbbbbbeeeebbbeeebbbbbbbbbbebbbbbbbbbeeeeeeebebbebbbeeeebbebeeeebbbeeeeeebbbebbebee:    

queryA      1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS:1147
                :**********************************:
7dk7_D_1    1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS:1147
SecStr          :  BTTTEEE S SSSSTT      B THHHHHH :    
ExpBur          :ebbeeebeeeeebeeeeeeeeeebeeeeeeeeee:

Protein Model on 7dk7_D_1_G_1 (TEMPLATE: 7dk7 )

Input Residue Numbers for Focused Sites