#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | C 1 (C) | polymer(polypeptide(L)) [1120 aa] | Spike glycoprotein :A0A6B9WHD3_CVHSA | |
2 | b | EA 1 (B) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 493Q(Y) (identity: 0.0 %/97.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7cn4_C_1 identity=97.3% |
queryA 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113 :****************** ***************** ************************* *************************************: 7cn4_C_1 14:QCVNLTTRTQLPPAYTNSSTRGVYYPDKVFRSSVLHLTQDLFLPFFSNVTWFHAIHVSGTNGIKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113 SecStr : S EEEEESEEEE SSS S EEEEEEEE TTEEEEEE TTTTTS EE SS EEEEEEESS EEEEEEESS STT: ExpBur :eeeebeeeeeeeeeebebbbbbbbbbeeeebeeeeeebeebbbbbebebebbeebbbeeeeeebbbebeebebeebbbbbbbbbebbbbbbbbbbebeee: queryA 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213 :****************************************************************************************************: 7cn4_C_1 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213 SecStr :S EEEEE SSSEEEEEEEEEEEEEEEE SSSS TT EEEEEEEEEEEEEEE S SS EEEEEEEEEETTEEEEEEEEE S: ExpBur :eebbbbbbeeeebebebbebebbeebbbbeeebeeeeeeeeebeebbeeeeeeebeeeeeebebeeeeeeebbebbbbbbbbeeeeebbbbbeeeebeee: queryA 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313 :**** ***********************************************************************************************: 7cn4_C_1 214:RDLPPGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313 SecStr :S SEEE EEEEEEE EEEEEEE SSSSS SSS S EEEEE EEEEEEEEE TTS EEEEEETTSSHHHHHHHHTTSS SEEE: ExpBur :eebbeeebbbeeebebebebebeebbbbbbbbeeebbeeeeeeebeeeebbbbbbebeebbbbbebeeebebeebbbbbbebbbbbbbeeeebebeebeb: queryA 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413 :********** ********************* ************************* ****************************** **********: 7cn4_C_1 314:QTSNFRVQPTDSIVRFPNITNLCPFGEVFNATTFASVYAWNRKRISNCVADYSVLYNSTSFSTFKCYGVSPTKLNDLCFTNVYADSFVITGDEVRQIAPG: 413 SecStr :E S S B HHHHSS S BGGG B SEE GGGGTTT SEEEEESS GGGTTS EESEEE EEEEEGGGGGG STT: ExpBur :ebeebbbeeeeebbbbeebeeebebeebbeeeebebbbebeeeebeebbbebeebeeebeeeeeebeebeeeebeebbbbbbebbbbbbbeebbebbbbe: queryA 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513 :************************* * * *** ********* ****************** **** * *** ** *** ** *** ********: 7cn4_C_1 414:QTGKIADYNYKLPDDFTGCVIAWNSKHIDAKEGGNFNYLYRLFRKANLKPFERDISTEIYQAGSKPCNGQTGLNCYYPLYRYGFYPTDGVGHQPYRVVVL: 513 SecStr : SHHHHHT SS EEEEEEE TTTS TT EEE SS TT BSSSS TT SSB SEEE SS TTSSEEEEEEE: ExpBur :eeeebbbebbebbeebebbbbbbebeeebbeeebbeebbbbeeeeeebeeeeebeeeebeeeeeeebeeeeeeebeebbeebebeeeeeebebbbbbbbb: Contact : b queryA 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613 :***** ************************************************************************************ *********: 7cn4_C_1 514:SFELLNAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNASNQVAVLYQ: 613 SecStr :EEE SS SEE S SS EEEESSS EEEEEEEE SS EEE SSS EEEEE TTT EEEEE S EEEEES TTT S EEEEE: ExpBur :bbeeeeeebbbbbeeeeeebeeeebbebbbbeeeeebbbeebeeebeeeebbbeeeeeeeebbbbbeeeebbebeebebeebbbbbbbbeebeebbbbbe: queryA 614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713 :******************************************************************* *****************************: 7cn4_C_1 614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNS----RSVASQSIIAYTMSLGAENSVAYSNNSIA: 709 SecStr :T GGGHHHHTTGGGS HHHHTTTS S EEE SSEEEESSEE S SEEEETTEEEEEE TTT----STT EEEEEE S TTEEE: ExpBur :ebebeebeeebbbeebbeebeebbeeeeebebebbbbbebeebeeeeeeebebeeebbbbbeebeee----eeeeeeebbbbeeeeeeeeeeeeeeeeee: queryA 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813 :****************************************************************************************************: 7cn4_C_1 710:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 809 SecStr :E S B EEEEEEEE EEEE HHHHHTSS HHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHHH S S S BTTB TTTSB SSSSS: ExpBur :bbeebebebeeebbbbbbebbebebeebbbeebeebeebbeeeeeeeeebeeebeebbebbbebbeebbbebeeeeebeeeeebeebebeebbeeeeeeb: queryA 814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913 :****************************************************************************************************: 7cn4_C_1 810:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 909 SecStr : BHHHHHHHHH TTTTS THHHHS SS HHHHTTTTTEEEE SS HHHHHHHHHHHHHHHHHHTTHHHHSS HHHHHHHHHHTTT T: ExpBur :ebbebbebbbebbeeebeeeeeeeeebeeeeeeeeeebbbeeebbeeeeeebeeeebbebbbbbbbbbbebbeebeeeeeeeeebbebbbebbeebebee: queryA 914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013 :************************************************************************ **************************: 7cn4_C_1 910:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLI:1009 SecStr :HHHHTTHHHHHHHHHHHHHHHHHHTTTS THHHHHHHHHHHHHHHHHHHHGGG TTSS S HHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :ebbeeeeeebbeebeebbeebeeebeeeeebeeebbebbeebeebbeebbeebeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebee: queryA 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113 :****************************************************************************************************: 7cn4_C_1 1010:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1109 SecStr :HHHHHHHHHHHHHHHHHHHTSS STTTSSSSSEEEEEEEEETTEEEEEEEE B EEEEE SSEEETTEEEEESS EE SS B B TTS B: ExpBur :ebeebeebbeebbebbeebbbbbbeeeebbeeeebbbbbbbbbbebbbbbbbbbeeeeeeebebbebbbeeeebbeeeebbbbbeeeebebbbebbbeee: queryA 1114:IITTDNTFVSGNCDVVIGIVNNTV:1137 :*********** ************: 7cn4_C_1 1110:IITTDNTFVSGSCDVVIGIVNNTV:1133 SecStr : SSSEEE SSS SSS B : ExpBur :ebeeeebeeeeeeeeeeeeeeebe: |