#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7cak_B_1_F_1

Protein Model on 7cak_B_1_F_1 (TEMPLATE: 7cak )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(queryA) B 1 (B) polymer(polypeptide(L)) [1028 aa] Spike glycoprotein :SPIKE_SARS2
2 b F 1 (F) polymer(polypeptide(L)) [107 aa] Light chain of H014 Fab 372A 373S 437N (identity: 100.0 %/91.4 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7cak_B_1 identity=91.4%
queryA        25:PPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNAT: 124
                :*********************************************          *********************************************:
7cak_B_1      25:PPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHXXXXXXXXXXDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNAT: 124
SecStr          :  EEEE TT   B SSS    S EEEEE  B  TT EEEEB    ----------    EE  SEE    EESS  EEEEEEESS SSSS   EEEEETT:    
ExpBur          :eeeebebbbbbbbbbeeeeeeeeeeebeeebbbbeeebebbeeee----------ebeebebeebbbbbbbbeeebbbbbbbbbebebeeebbbbeeeee:    

queryA       125:NVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALE: 224
                :************************************************             ***************************************:
7cak_B_1     125:NVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSXXXXXXXXXXXXXFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALE: 224
SecStr          :EEEEE   EEE SS  EE   SSSSTT  GGG  SEEEE   S EEE -------------  EEEE  EEEETTEEEEEEEEEE   SSS  S    BE:    
ExpBur          :eeebebbbbebeeebbbbbeeebeeebeeeebeebeeeeeeeeeeeee-------------beebebbbbbbeeeebbbbbeeeebeeeebbeeeeebbe:    

queryA       225:PLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTE: 324
                :*********************                 **************************************************************:
7cak_B_1     225:PLVDLPIGINITRFQTLLALHXXXXXXXXXXXXXXXXXAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTE: 324
SecStr          :EEEEE      SEEEEEEEE -----------------  B     B  EEEEE  TTS   EEEESTT HHHHHHHHHT S   SEEEEEEE      S:    
ExpBur          :eeeebeeebebeebbbbbbee-----------------ebbbbbbbeeeebbbebbeebebeebbbbeeeebbebbbeeeebebeebebebeebeeeeee:    

queryA       325:SIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYK: 424
                :****************************************************************************************************:
7cak_B_1     325:SIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYK: 424
SecStr          :  EE  TT      HHHHT SS  BTTS    EE SEE  GGGTTSSS  S  EE SS TTSTTTS  SSEEE  EEEEGGGGTTSSTT  SHHHHTTS :    
ExpBur          :ebebbeeeeeebebeebbeeeebebbeebeeeebeebbbbeeebeeeeebeeeebeeeeeeebeebebbebbbbbbbbebebeebbbeeeebbbbbebbb:    
Contact         :                                               bb                                                   

queryA       425:LPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATV: 524
                :********************  ******************************************************************************:
7cak_B_1     425:LPDDFTGCVIAWNSNNLDSKXXGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATV: 524
SecStr          :  SS BSEEEEEE TTTT  --     EEE   SS   TT      S EE SSS  TTS  TTEE SEEE    TT  TTT EEEEE EEB SSSS  SE:    
ExpBur          :bbeebbbbbbbbebbeebbe--ebeebbbbeebeeebeeeeeeeeeeeeeeeeeebeeeeeeebeebbeebebeeebeeeebbbbbbbbbbeeeeeeebb:    
Contact         :            b                                                                                       

queryA       525:CGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPVAI: 624
                :************************************************************************************************    :
7cak_B_1     525:CGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVXXXX: 624
SecStr          :E          SSEEEEEETTEEEEEE  B      SS  S   TT     EE SSS  EE        EEEEEE  TTT S  EEEEET  TT  ----:    
ExpBur          :bbeeeeeebeeeebbebebeebeeebbbbebeeebeeeeeebeeeeeeebbbbbbeeeebbebeeeeebbbbbbbbbbeebeebbbbeeebeeeee----:    

queryA       625:HADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTT: 724
                :                ************************************            ************************************:
7cak_B_1     625:XXXXXXXXXXXXXXXXNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTT: 724
SecStr          :---------------- EEE SSEEEES EE SS    SEEEETTEEEE   ------------    EEEE  SS        TTEEEEE  B      :    
ExpBur          :----------------eebebeebbbeebeebeeeeeeebebeeebbbbbee------------eebbbbbeeeeeeeeeeeeeeeeeebbbebebebee:    

queryA       725:EILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFN: 824
                :****************************************************************************************************:
7cak_B_1     725:EILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFN: 824
SecStr          :EEEE      EE HHHHHSSS HHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH   SS     SS  STT   TTTS  TTSSS   HHHHHHHH:    
ExpBur          :ebbbbbbebbbbebeebbbeebeebeebbeeeeeebeebeeebeebbeebbebbeebbeebeeebebeeeeebeebebeebbeeeeeeeeebebbbbbbe:    

queryA       825:KVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIA: 924
                :***                     ****************************************************************************:
7cak_B_1     825:KVTXXXXXXXXXXXXXXXXXXXXXLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIA: 924
SecStr          :H  --------------------- HHHHTTSSEE    SS HHHHHHHHHHHHHHHHHSTTTTSSSS     GGGTTTHHHHTTS  THHHHHHHHHHH:    
ExpBur          :ebe---------------------eeeebeeeebeeeeeebeeeebbeebbbbbbbbbebbeebeeeeeeeeebbebbbebbeebebeeebbeeeeeebb:    

queryA       925:NQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANL:1024
                :*************************************************************  *************************************:
7cak_B_1     925:NQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANL:1024
SecStr          :HHHHHHHHHHHHHHHT SSSTHHHHHHHHHHHHHHHHHHHGGG  TTSS S HHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :eebeebbeebbeebeeeeeebeebbebbeebeebbeebeeebeeeeebeebebeebeeebeeeebeebbeebbebbbebbeebbeebeebbeebeebbee:    

queryA      1025:AATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSG:1124
                :****************************************************************************************************:
7cak_B_1    1025:AATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSG:1124
SecStr          :HHHHHHHTTSS   STTTSSSSEEEEEEEEEETTEEEEEEEEE B  EEEEE  S  BSSSB  EESSS EEESSSSEEE  SSS      BTTTEE  S:    
ExpBur          :bbebbeebbbebbeeeebbbeeebbbbbbbbbbebbbbbbbbbbeeeeeebeebebbbeeeebbeeeebbbbbeeeebbbbbebbeeeeebbeebbeeee:    

queryA      1125:NCDVVIGIVNNTVYDPLQPELDS:1147
                :***********************:
7cak_B_1    1125:NCDVVIGIVNNTVYDPLQPELDS:1147
SecStr          :BSTTSSS  B   B SSTTTTT :    
ExpBur          :ebeeeeeeeeeebeeeeeeeeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123