[pdbjlvh2]Protein Model on 7cai_A_1_D

#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7cai_A_1_D_1

Protein Model on 7cai_A_1_D_1 (TEMPLATE: 7cai )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(queryA)	A 1 (A)	polymer(polypeptide(L)) [1023 aa]	Spike glycoprotein :SPIKE_SARS2
2	b		D 1 (D)	polymer(polypeptide(L)) [207 aa]	Light chain of H014 Fab	369Y 372A 373S 374F 375S 437N 503V (identity: 100.0 %/90.9 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7cai_A_1 identity=90.9%

queryA        25:PPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNAT: 124
                :*********************************************          *********************************************:
7cai_A_1      25:PPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHXXXXXXXXXXDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNAT: 124
SecStr          :     B TT  EE SSS    S EEEEE  B  SS B        ----------    EE  SEEEEEE  SS    EEEEES SSSSS   EEEEETT:    
ExpBur          :eeeeeebebbbbbbbeeeeeeeeeeebebbbbbbeeebebbebee----------ebeebebeebbbbbbbbeebbbebbbbbeebeeebebbbbbbeee:    

queryA       125:NVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALE: 224
                :************************************************             ***************************************:
7cai_A_1     125:NVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSXXXXXXXXXXXXXFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALE: 224
SecStr          :EEEEE   EEE SS   B  SS SSSS  TT   SEEEE   S B   -------------  EEEEEEEEEETTEEEEEE  EE   SSS  S   EEE:    
ExpBur          :eebbbbbbbebeeebbbbbeeebeeebeeeebeebeeeeeeeeeeeee-------------eeebbbbbbbbeeeebbbbbeeeebeeeebbbeeeebbe:    

queryA       225:PLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTE: 324
                :*********************                 **************************************************************:
7cai_A_1     225:PLVDLPIGINITRFQTLLALHXXXXXXXXXXXXXXXXXAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTE: 324
SecStr          :EEEEE       EEEEE  B -----------------        B  EEEEE  TTS   EEEESTTSHHHHHHHHHT S   SEE    B      S:    
ExpBur          :eeeebebebebeebbbbbbee-----------------ebbbbbbbeeeebbbebbeebebeebbbbeeeebbebbbeeebbebeeeebeeeebebeeee:    

queryA       325:SIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYK: 424
                :****************************************************************************************************:
7cai_A_1     325:SIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYK: 424
SecStr          :  EE   SS    SHHHHT SS B SSS EEEEE SS B TTTTSSSS  SEEEESSS HHHHTT   SSEEEEEEEEEGGGGTTSSSS  SSHHHHT  :    
ExpBur          :ebebbeeeeeebebeebbeeeebebbebbeeeebeebbbbbeebeeeeebeeeebeeeeeeebeebebbebbbbbbbbebebbebbbeeeeeebbeebbb:    
Contact         :                                            b  bbbb                                                 

queryA       425:LPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATV: 524
                :********************  ******************************************************************************:
7cai_A_1     425:LPDDFTGCVIAWNSNNLDSKXXGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATV: 524
SecStr          :  SS  EEEEEEE TTTT  -- B S EEE   SS   TT        EE SSS  TTS BTTEE SEEE  B TTS TTTSEEEEEEEEE  SSS SS :    
ExpBur          :bbeebebbbbbbebeeebbe--ebeebbbbeeeeeebeeeeebeeeebeeeeeeebeeeeeeebeebbeebebeeeeeeeebbbbbbbbbbeeeeeeeeb:    
Contact         :            b                                                                 b                     

queryA       525:CGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPVAI: 624
                :************************************************************************************************    :
7cai_A_1     525:CGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVXXXX: 624
SecStr          :  B        SEEEEEEETTEEEEEEE        TT   B  TTS   EEE TTS  EEE       BEEEEE  TTT S  EEEEET  SS  ----:    
ExpBur          :ebbeebeebeeeebbebebeebeeebbbbeeeeebeeeeeebeeeeeeeebbbbbeeeebbebeebbebbbbbbbbbbeebeebbbbeeebeeeee----:    

queryA       625:HADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTT: 724
                :                ************************************            ************************************:
7cai_A_1     625:XXXXXXXXXXXXXXXXNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTT: 724
SecStr          :---------------- EEE SSEEEES EE S     SEEEETTEEEE   ------------    EEEE   S       BTTEEEEES EEEEEEE:    
ExpBur          :----------------eebebeebbbeebeeeeeeeeeebebeeebbbbbee------------eeebbbbeeeeeeeeeeeeeeeeeebbbebebebee:    

queryA       725:EILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFN: 824
                :****************************************************************************************************:
7cai_A_1     725:EILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFN: 824
SecStr          :EEEE         TTTTTS S HHHHHHHHHHGGGTHHHHHHHHHHHTTHHHHHHHHH   SS     SS  SSS   TTTS  SSSSS   HHHHHHHH:    
ExpBur          :ebbbbbbbbbebebeebbbeebeebeebbeeeeeebeebeeebeebbeebbebbeebbeebeeebeeeeeeebeebebeebbeeeeeeeeebebbbbbbe:    

queryA       825:KVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIA: 924
                :***                          ***********************************************************************:
7cai_A_1     825:KVTXXXXXXXXXXXXXXXXXXXXXXXXXXKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIA: 924
SecStr          :H  --------------------------  SS      SS HHHHHHHHHHHHHHHHHHTTTTTSSS     HHHHHHHHHTTTT  THHHHHHHHHHH:    
ExpBur          :ebe--------------------------eeeebeeeeeebeeeebbeebbbbbbbbbebbeebeeeeeeeeebeebbbebbeebebeeebbeeeeeebb:    

queryA       925:NQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANL:1024
                :*************************************************************  *************************************:
7cai_A_1     925:NQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANL:1024
SecStr          :HHHHHHHHHHHHHHHH SSSSHHHHHHHHHHHHHHHHHHHGGG  TTSS SSHHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :eebeebbeebbeebeeeeeebeebeebbeebeebeeebeeebeeeeebebbebeebeeeeeeeebeebbeebbebbbebbeebbeebeebbeebeebbee:    

queryA      1025:AATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSG:1124
                :****************************************************************************************************:
7cai_A_1    1025:AATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSG:1124
SecStr          :HHHHHHHTTTS   STTTSSSSEEEEEEEEEETTEEEEEEEEEEE  EEEEE  S EESSSSEEEESSS EEESSSSEEE  SSS    B BTTTEEE S:    
ExpBur          :bbebbeebbbebbeeeebbbeeebbbbbbbbbbebbbbbbbbbbeeeeeebebbebbbeeeebbeeeebbbbbeeeebbbbbebbbbeeebbeebbeeee:    

queryA      1125:NCDVVIGIVNNTVYDPLQPELDS:1147
                :***********************:
7cai_A_1    1125:NCDVVIGIVNNTVYDPLQPELDS:1147
SecStr          : TTTSSS EE   B SHHHHH  :    
ExpBur          :ebeeeeeeeeeebeeeeeeeeee:

Protein Model on 7cai_A_1_D_1 (TEMPLATE: 7cai )

Input Residue Numbers for Focused Sites