[pdbjlvh2]Protein Model on 7cac_B_1_E

#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7cac_B_1_E_1

Protein Model on 7cac_B_1_E_1 (TEMPLATE: 7cac )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(queryA)	B 1 (B)	polymer(polypeptide(L)) [1026 aa]	Spike glycoprotein :SPIKE_SARS2
2	b		E 1 (E)	polymer(polypeptide(L)) [214 aa]	Heavy chain of H014 Fab	369Y 376T 377F 378K 379C 380Y 384P 385T 386K 404G 405D 408R 411A 412P 413G 414Q 503V 504G 508Y (identity: 100.0 %/90.9 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7cac_B_1 identity=90.9%

queryA        25:PPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNAT: 124
                :*********************************************          *********************************************:
7cac_B_1      25:PPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHXXXXXXXXXXDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNAT: 124
SecStr          :  B  B TT   B  SS    SEEEEEE  B  TT B EE     ----------    EE TT EEEEEEESS  EEEEEEES SSSSS   EEEEETT:    
ExpBur          :eeeeeebbebbbbbbeeeeeeeeeeebebbbbbbeeebbebeeee----------ebeebebeebbbbbbbbeebbbebbbbbeebebebebbbbbeeee:    

queryA       125:NVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALE: 224
                :************************************************             ***************************************:
7cac_B_1     125:NVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSXXXXXXXXXXXXXFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALE: 224
SecStr          :EEEEE   EEE SS  EE B SSSSSB  SS   SEEEE   S EEE -------------  EEEEEEEEEETTEEEEEEEEEE   SSS  S    BE:    
ExpBur          :eebbbbbbbebeeebebbbeeeeeeeeeeeebeebeeeeeeeeeeeee-------------eeebebbbbbeeeeebebbbeeeebeeeebbbeeeebbe:    

queryA       225:PLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTE: 324
                :*********************                 **************************************************************:
7cac_B_1     225:PLVDLPIGINITRFQTLLALHXXXXXXXXXXXXXXXXXAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTE: 324
SecStr          :EEEEE      SEEEEEEEE -----------------   EEE  B  EEEEEE TTS EEEEEEGGG HHHHHHHHHT SS  SEEEEEEE      S:    
ExpBur          :eeeebeeebebeebbbbbbee-----------------ebbbbbebeeeebbbebbeeeebeebbbbeeeebbebbbeeeebebeeeebebeeeebeeee:    

queryA       325:SIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYK: 424
                :****************************************************************************************************:
7cac_B_1     325:SIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYK: 424
SecStr          : EEE  TTTS   SHHHHT SS   SSS EEEEE S B  TTGGGSSS  SEEEESSS SSGGGT   S EEEEEEEE GGGSTT STT  SHHHHTT  :    
ExpBur          :ebbbeeeeeeebebeebbebeebebbeebeeeebeebbbebeebeeeeeeeeeebeeeeeeebeebebbebebbbbbbebebbebbbeeeebbbbbebbb:    
Contact         :                                            b      bbbbb   bbb                 bb  b  bbbb          

queryA       425:LPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATV: 524
                :********************  ******************************************************************************:
7cac_B_1     425:LPDDFTGCVIAWNSNNLDSKXXGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATV: 524
SecStr          :  TT  EEEEEEE TTTT  -- B  SEEE   SS   TT      S EESSSS  TT  BTTEE SEEE  B TTS TTTS EEEEEEEE  SSS  SS:    
ExpBur          :bbeebebbbbbbebeeebbe--ebeebbbbeeeeeebeeeeebeeeebeeeeeeebeeeeeeebeebbeebebeeeeeebebbbbbbbbbbeeeeeeeeb:    
Contact         :                                                                              bb   b                

queryA       525:CGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPVAI: 624
                :************************************************************************************************    :
7cac_B_1     525:CGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVXXXX: 624
SecStr          :B SS       SSEEEEEETTEEEEEE EE      TT    B TTS B  EE SSS  EEE       EEEEEE  TTT S  EEEEES  SS  ----:    
ExpBur          :bbbeeeeebeeeebbebebeebeeebbbbeeeeebeeeeeebeeeeeeeebbbbbeeeebbebeebeeebbbbbbbbbeebeebbbbeeebeeeee----:    

queryA       625:HADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTT: 724
                :                ************************************            ************************************:
7cac_B_1     625:XXXXXXXXXXXXXXXXNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTT: 724
SecStr          :---------------- EEE SSEEEES EE SS  B  EEEETTEEEE   ------------    EEEE B S        TTEEEEES EEEEEEE:    
ExpBur          :----------------eeeebeebbbeebeebeeeeeeebebeeebbbbbee------------eeebbbbeeeeeeeeeeeeeeeeeebbbebebebee:    

queryA       725:EILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFN: 824
                :****************************************************************************************************:
7cac_B_1     725:EILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFN: 824
SecStr          :EEEE      EE HHHHHS S HHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHH   SS     SS  SSS   TTTS  TTSSS   HHHHHHHH:    
ExpBur          :ebbbbbbebbebebeebbbeebeebeebbeeeeeebeebeeebeebbeebbebbeebbbebeeebebeeeeebeebebeebbeeeeeebeebebbbbbbe:    

queryA       825:KVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIA: 924
                :***                        *  **********************************************************************:
7cac_B_1     825:KVTXXXXXXXXXXXXXXXXXXXXXXXMAYRFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIA: 924
SecStr          :H  ----------------------- HHHHHTEE    SS HHHHHHHHHHHHHHHHHHTTTTSSSS     HHHHHHHHHHHHT  THHHHHHHHHHH:    
ExpBur          :ebe-----------------------eeeeeebbeeeeeebeeeebbeebbbbbbbbbebbeebeeeeeeeeebbebbbebbebbebeeebbeeeeeebb:    

queryA       925:NQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANL:1024
                :*************************************************************  *************************************:
7cac_B_1     925:NQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANL:1024
SecStr          :HHHHHHHHHHHHHHHH SSTTHHHHHHHHHHHHHHHHHHHGGG  TTSS S HHHHHTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :eebeebbeebbeebeebeeebeebeebbeebeebbeebeeebeeeeebeeeebeebbeebeeeebeebbeebbebbbebbeebbeebeebbeebeebbee:    

queryA      1025:AATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSG:1124
                :****************************************************************************************************:
7cac_B_1    1025:AATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSG:1124
SecStr          :HHHHHHHTTTS   SSSSSSSSEEEEEEEEEETTEEEEEEEEEEE  EEEEEEES EESSSSEEEESSSEEEESSSSEEEE SSS   B  BTTTEEE S:    
ExpBur          :bbebbeebbbeebeeeebbeeeebbbbbbbbbbebbbbbbbbbbeeeeeebebbebbbeeeebbebeebebbbeeeebbbbbebbebeeebbeebbeeee:    

queryA      1125:NCDVVIGIVNNTVYDPLQPELDS:1147
                :***********************:
7cac_B_1    1125:NCDVVIGIVNNTVYDPLQPELDS:1147
SecStr          : TTT SS EE   B SHHHHHH :    
ExpBur          :eeeeeeebeeeebeeeeeeeeee:

Protein Model on 7cac_B_1_E_1 (TEMPLATE: 7cac )

Input Residue Numbers for Focused Sites