#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | C 1 (C) | polymer(polypeptide(L)) [1049 aa] | Spike glycoprotein :SPIKE_SARS2 | |
2 | b | H 1 (J) | polymer(polypeptide(L)) [229 aa] | heavy chain of 4A8 | 144Y 145Y 146H 147K 150K 152W 245H 246R 247S 248Y 249L (identity: 100.0 %/92.4 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7c2l_C_1 identity=92.4% |
queryA 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113 :****************************************************************************************************: 7c2l_C_1 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113 SecStr : S S B SS EE SS S EEEEEEEE TT EEEESSEE TTS EE EE TT EEEEE SS EEEE BSSSSSS: ExpBur :eeeeeeeebeeeeeebebebbbbbebeeeeeeeeeeebeebbbbbebebbbbebbeeeeeeeeeebebeebebeebbbbbbebeeebbbbbbbbbebeee: queryA 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213 :****************************************************************************************************: 7c2l_C_1 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213 SecStr :S EEEEE TT EEEEEEEEEE SS EEE SSSSS TTTEEEEES EEEES S SSSS EEEEEEE SS EEEEEEE SS: ExpBur :eebbbbbbeeeebbbebbebebbebbbbbbeeeeeeeeeeebeebbbeeeeeeeeeeeeebbbeeebeeebeeebbbbbbbbeeeeebbbbbeebebeee: Contact : bbbb b b queryA 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313 :************************************** **********************************************************: 7c2l_C_1 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPXXXXSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313 SecStr :SS SS EEEEEEE EE EEEEEE S ---- S EEEEEE EEEEEEEEE SSS EEEEEEESSSHHHHHHHHHTSS SEEE: ExpBur :ebbbeeebbbeeebebeeebebeebbbbbbbeeeeeee----eebebeebbbbbbebeeeebbbebeeebebeebbbbeeeebbebbbeeeeeebeebee: Contact : bbbbb queryA 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413 :****************************************************************************************************: 7c2l_C_1 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413 SecStr :EEEEEE SB B S B HHHHS S STT EEEEE S B SHHHHSS S EEEESS TTGGGT EESEEEEEEEEEEGGGGGSSSTT: ExpBur :ebeeeeeeeeeebbbbeeeeeebebeebbeeeebebbeebeeeebeebebebeebeeeeeeebeebeebeeeebeeebbbebbbbbbbbeeebbebbbee: queryA 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513 :**************************** *********************** ***************************: 7c2l_C_1 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLXXXXXXXYNYLYRLFRKSNLKPFERDISTEXXXXXXXXXXXXXXXNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513 SecStr : SSHHHHT SS EEEE B S ------- EEE S TT SS --------------- EEE SSS GGGSEEEEEEE: ExpBur :eeeebbbebbebbeebebbbbbbebeee-------eebeebeeebeebeeeeeeeeee---------------eeeebbeebeeeeeeeeeebbbbbbbb: queryA 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613 :****************************************************************************************************: 7c2l_C_1 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613 SecStr :EEE SSSS EE S SS BB EETTEE BEEEE TT EEESSTT EEEEE TTT EEEEE EEEEEEEES TTT EEEEE: ExpBur :bbeeeeeebebbbeeeeeeeeeeebbebbbeeeeeebbbeebeeebeeeeeeeeeeeeeeebbbbeeeeebbbbeebeebbbbbbbbbbeebeeebbbbe: queryA 614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713 :******* *********************************** ************************: 7c2l_C_1 614:DVNCTEVXXXXXXXXXXXXXXXXXXXXNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQXXXXXXXXXXXXXXQSIIAYTMSLGAENSVAYSNNSIA: 713 SecStr :S TT -------------------- EEE SSEEEES EE S S SEEEETTEEEEE -------------- EEEEE TTEEE: ExpBur :ebeeeee--------------------eebebeebbbeebeebeeeeeeebebeeebbbbee--------------eebbbbeeeeeeeeeeeeeeeeee: queryA 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813 :****************************************************************************************************: 7c2l_C_1 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813 SecStr :EEEEEEEEEEEEEEE EEE HHHHHT S HHHHHHGGGGTTHHHHHHHHHHHHHHHHHHHHHHHT SS SS STT TTTS SSSSS: ExpBur :bbeebebebeeebbbbbbebbebebeebbbeebeebeebbeeeeeebeebeeebeebbeebeebbeebbeebeeebeeeeeeebeebebeebbeeeeeee: queryA 814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913 :*************** *************************************************************: 7c2l_C_1 814:KRSFIEDLLFNKVTLXXXXXXXXXXXXXXXXXXXXXXXXQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913 SecStr : HHHHHHTTTS ------------------------ SSSEEE SS HHHHHHHHHHHHTHHHHTTTGGGSSS HHHHHHHHHHHHT T: ExpBur :ebbebbbbbbeebee------------------------eeeebbeeeeeebeeeebbeebbbbbbbbbebbeebeeeeeeebebbebbbebbeebebee: queryA 914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013 :************************************************************************ **************************: 7c2l_C_1 914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLI:1013 SecStr :HHHHHSHHHHHHHHHHHHHHHHHHHTTSS S HHHHHHHHHHHHHHHHHHHGGG TTSS S HHHHHHSS HHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :ebbeeeeeebbeebeebbeebeeebeeeeeebeebbebeeebeebeeebeeebeeeeebebeebeebeeeeeeeebeeebeebbebbbebbeebbeebee: queryA 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113 :****************************************************************************************************: 7c2l_C_1 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113 SecStr :HHHHHHHHHHHHHHHHHTTTSS STTTTSSSEEEEEEEEE SSEEEEEEEEEEEEEEEEEEEES EEETTEEEEESSSEEEESSS EEEEETTEEEEE: ExpBur :bbeebeebbeebbebbeebbbebbeeeebbeeeebbbbbbbbbeebbbbbbbbbeeeeeeebeebebbbeeeebbeeeebbbbbeeeebebbbeebbeee: queryA 1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD:1146 :*********************************: 7c2l_C_1 1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD:1146 SecStr : SSSEEEEEETTSSTT EE SSHHHH : ExpBur :ebbeebbeeeeebeebeeeeeeebeeeeeeeee: |