#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7c2l_C_1_H_1

Protein Model on 7c2l_C_1_H_1 (TEMPLATE: 7c2l )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) C 1 (C) polymer(polypeptide(L)) [1049 aa] Spike glycoprotein :SPIKE_SARS2
2 b H 1 (J) polymer(polypeptide(L)) [229 aa] heavy chain of 4A8 144Y 145Y 146H 147K 150K 152W 245H 246R 247S 248Y 249L (identity: 100.0 %/92.4 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7c2l_C_1 identity=92.4%
queryA        14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113
                :****************************************************************************************************:
7c2l_C_1      14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113
SecStr          :       S   S  B   SS  EE  SS    S EEEEEEEE  TT   EEEESSEE TTS  EE     EE TT EEEEE  SS  EEEE  BSSSSSS:    
ExpBur          :eeeeeeeebeeeeeebebebbbbbebeeeeeeeeeeebeebbbbbebebbbbebbeeeeeeeeeebebeebebeebbbbbbebeeebbbbbbbbbebeee:    

queryA       114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213
                :****************************************************************************************************:
7c2l_C_1     114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213
SecStr          :S EEEEE  TT EEEEEEEEEE SS  EEE   SSSSS     TTTEEEEES   EEEES S      SSSS   EEEEEEE  SS  EEEEEEE   SS:    
ExpBur          :eebbbbbbeeeebbbebbebebbebbbbbbeeeeeeeeeeebeebbbeeeeeeeeeeeeebbbeeebeeebeeebbbbbbbbeeeeebbbbbeebebeee:    
Contact         :                              bbbb  b b                                                             

queryA       214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313
                :**************************************    **********************************************************:
7c2l_C_1     214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPXXXXSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313
SecStr          :SS  SS  EEEEEEE        EE EEEEEE   S  ----     S  EEEEEE EEEEEEEEE SSS EEEEEEESSSHHHHHHHHHTSS   SEEE:    
ExpBur          :ebbbeeebbbeeebebeeebebeebbbbbbbeeeeeee----eebebeebbbbbbebeeeebbbebeeebebeebbbbeeeebbebbbeeeeeebeebee:    
Contact         :                               bbbbb                                                                

queryA       314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413
                :****************************************************************************************************:
7c2l_C_1     314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413
SecStr          :EEEEEE    SB  B  S   B   HHHHS S    STT EEEEE S B  SHHHHSS   S EEEESS TTGGGT EESEEEEEEEEEEGGGGGSSSTT:    
ExpBur          :ebeeeeeeeeeebbbbeeeeeebebeebbeeeebebbeebeeeebeebebebeebeeeeeeebeebeebeeeebeeebbbebbbbbbbbeeebbebbbee:    

queryA       414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513
                :****************************       ***********************               ***************************:
7c2l_C_1     414:QTGKIADYNYKLPDDFTGCVIAWNSNNLXXXXXXXYNYLYRLFRKSNLKPFERDISTEXXXXXXXXXXXXXXXNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513
SecStr          :  SSHHHHT    SS  EEEE  B S  -------   EEE S TT   SS       ---------------     EEE    SSS GGGSEEEEEEE:    
ExpBur          :eeeebbbebbebbeebebbbbbbebeee-------eebeebeeebeebeeeeeeeeee---------------eeeebbeebeeeeeeeeeebbbbbbbb:    

queryA       514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613
                :****************************************************************************************************:
7c2l_C_1     514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613
SecStr          :EEE SSSS  EE S        SS BB EETTEE  BEEEE      TT  EEESSTT EEEEE TTT  EEEEE   EEEEEEEES TTT    EEEEE:    
ExpBur          :bbeeeeeebebbbeeeeeeeeeeebbebbbeeeeeebbbeebeeebeeeeeeeeeeeeeeebbbbeeeeebbbbeebeebbbbbbbbbbeebeeebbbbe:    

queryA       614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713
                :*******                    ***********************************              ************************:
7c2l_C_1     614:DVNCTEVXXXXXXXXXXXXXXXXXXXXNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQXXXXXXXXXXXXXXQSIIAYTMSLGAENSVAYSNNSIA: 713
SecStr          :S  TT  -------------------- EEE SSEEEES EE S   S SEEEETTEEEEE --------------  EEEEE            TTEEE:    
ExpBur          :ebeeeee--------------------eebebeebbbeebeebeeeeeeebebeeebbbbee--------------eebbbbeeeeeeeeeeeeeeeeee:    

queryA       714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813
                :****************************************************************************************************:
7c2l_C_1     714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813
SecStr          :EEEEEEEEEEEEEEE     EEE HHHHHT S HHHHHHGGGGTTHHHHHHHHHHHHHHHHHHHHHHHT   SS     SS  STT   TTTS  SSSSS:    
ExpBur          :bbeebebebeeebbbbbbebbebebeebbbeebeebeebbeeeeeebeebeeebeebbeebeebbeebbeebeeebeeeeeeebeebebeebbeeeeeee:    

queryA       814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913
                :***************                        *************************************************************:
7c2l_C_1     814:KRSFIEDLLFNKVTLXXXXXXXXXXXXXXXXXXXXXXXXQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913
SecStr          :   HHHHHHTTTS  ------------------------  SSSEEE   SS HHHHHHHHHHHHTHHHHTTTGGGSSS     HHHHHHHHHHHHT  T:    
ExpBur          :ebbebbbbbbeebee------------------------eeeebbeeeeeebeeeebbeebbbbbbbbbebbeebeeeeeeebebbebbbebbeebebee:    

queryA       914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013
                :************************************************************************  **************************:
7c2l_C_1     914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLI:1013
SecStr          :HHHHHSHHHHHHHHHHHHHHHHHHHTTSS S HHHHHHHHHHHHHHHHHHHGGG  TTSS S HHHHHHSS HHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :ebbeeeeeebbeebeebbeebeeebeeeeeebeebbebeeebeebeeebeeebeeeeebebeebeebeeeeeeeebeeebeebbebbbebbeebbeebee:    

queryA      1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113
                :****************************************************************************************************:
7c2l_C_1    1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113
SecStr          :HHHHHHHHHHHHHHHHHTTTSS   STTTTSSSEEEEEEEEE SSEEEEEEEEEEEEEEEEEEEES EEETTEEEEESSSEEEESSS EEEEETTEEEEE:    
ExpBur          :bbeebeebbeebbebbeebbbebbeeeebbeeeebbbbbbbbbeebbbbbbbbbeeeeeeebeebebbbeeeebbeeeebbbbbeeeebebbbeebbeee:    

queryA      1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD:1146
                :*********************************:
7c2l_C_1    1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD:1146
SecStr          :   SSSEEEEEETTSSTT EE     SSHHHH :    
ExpBur          :ebbeebbeeeeebeebeeeeeeebeeeeeeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123