#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | B 1 (B) | polymer(polypeptide(L)) [1055 aa] | Spike glycoprotein :SPIKE_SARS2 | |
2 | b | V 1 (V) | branched(oligosaccharide) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 281E 282N (identity: 100.0 %/92.9 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7c2l_B_1 identity=92.9% |
queryA 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113 :****************************************************************************************************: 7c2l_B_1 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113 SecStr : S S B SS EE S S B B TT EEEESSEE TTS EE EE TT EEEEE SS EEEE BSSSSSS: ExpBur :eeeeeeeebeeeeeebebebbbbbbbeeeeeeeeeeeeeebbbbbeeebbbbebbeeeeeeeeeebebeebebeebbbbbbebeeebbbbbbbbbebeee: queryA 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213 :****************************************************************************************************: 7c2l_B_1 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213 SecStr :S EEEEE TT EEEEEEEEEE SS EEE SSSSS TTTEEEEES EEEES S SSSS EEEEEEE SS EEEEEEE SS: ExpBur :eebbbbbbeeeebbbebbebebbebbbbbbeeeeeeeeeeebeebbbeeeeeeeeeeeeebbbeeebeeebeeebbbbbbbbeeeeebebbbeebebeee: queryA 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313 :************************************** **********************************************************: 7c2l_B_1 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPXXXXSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313 SecStr :SS SS EEEEEEE EE EEEEEE S ---- S EEEEEE B EEEEE SSS EEEEEESSSSHHHHHHHHHTSSS EEEEE: ExpBur :ebbbeeebbbeeebebeeebebeebbbbbbbeeeeeee----eebebeebbbbbbebeebebbbebeeebebeebbbbeeeebbebbbeeeebebeebee: Contact : bb queryA 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413 :****************************************************************************************************: 7c2l_B_1 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413 SecStr :EEEEEE B B S SHHHHS S STT EEEEE SSB THHHHS SS SEEEESSS GGGGGG EES EEEEEEEE STTGGG SSS: ExpBur :ebeebeeeeeeebbbbeeeeeebebeebbeeeebebbeebeeeebeebebebeebeeeeebeeeebeebeeeebeeebbbbbebbbbbbebebeebbbee: queryA 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513 :****************************** **************************** ************ ***********: 7c2l_B_1 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSXXXXXYNYLYRLFRKSNLKPFERDISTEIYQAGXXXXXXXXXXNCYFPLQSYGFQXXXXVGYQPYRVVVL: 513 SecStr : SHHHHHS SS EEEEEE TTT ----- B SSS TT TT ---------- S S B ---- S EEEEEE: ExpBur :eeeebbeebbbbeeeebbbbbbbebeeebe-----eebbbebebeeebeeeeeeeeeeeeeee----------eeeebbeebeee----ebebbbbbbbb: queryA 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613 :****************************************************************************************************: 7c2l_B_1 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613 SecStr :EE SSS EE SS EEEEETTEEEEEEEEE SS TT EEE STT EEEEE TTT EEEEE EEEEEEEEEETTT EEEEE: ExpBur :bbeeeeeebebbbeeeeeebbeeebbebebbeeeeebebeebeeebeeeeeeeeeeeeebebbbbbeeeebbebeebeebbbbbbbbbbeebeeebbbbe: queryA 614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713 :******* *************************************** ************************: 7c2l_B_1 614:DVNCTEVXXXXXXXXXXXXXXXXXTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXXQSIIAYTMSLGAENSVAYSNNSIA: 713 SecStr :T SS ----------------- S EEETTEEEES EE S SEEEETTEEEE ------------- EEEE TTEEE: ExpBur :ebebeee-----------------eeeeebebeebbbbbbeebeeeeeeebebeeebbbbeee-------------eebbbbeeeeeeeeeeeeeeeeee: queryA 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813 :****************************************************************************************************: 7c2l_B_1 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813 SecStr :EEEEEEEEEEEEEEE EEEE HHHHHTSS HHHHHHHGGG SHHHHHHHHHHHHHHHHHHHHHHHH SS SS TT TTTSB SSSGG: ExpBur :bbeebebebeeebbbbbbebbebebeebbbeebeebeebbeeeeeebeebeeebeebbebbeebbeebbeebeeebeeeeeeebeebebeebbeeeeeeb: queryA 814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913 :************** *************************************************************: 7c2l_B_1 814:KRSFIEDLLFNKVTXXXXXXXXXXXXXXXXXXXXXXXXXQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913 SecStr :G BHHHHHHHTS ------------------------- SSSEEEE SS HHHHHHHHHHHHHHHTTTTTTTSSSS HHHHHHHHHHHHT T: ExpBur :ebbebbbbbbeebe-------------------------eeeeebeeeeeebeeeebbeebebbbbbbbebbeebeeeeeeebebbebbbebbeebebee: queryA 914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013 :************************************************************************ **************************: 7c2l_B_1 914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLI:1013 SecStr :HHHHHTHHHHHHHHHHHHHHHHHHHHTS TTHHHHHHHHHHHHHHHHHHGGGG TTSS SSTTTTTTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :ebbeeeeeebbeebeebbbebeeebeeeeeebeebbebeeebeebeeebeeebeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebee: queryA 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113 :****************************************************************************************************: 7c2l_B_1 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113 SecStr :HHHHHHHHHHHHHHHHHHHHSS STTSSSSSEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEES EEETTEEEEESSSEEEESSS EEEE TTS B: ExpBur :bbeebeebbeebbebbeebbbebbeeeebbbeeebbbbbbbbbbebbbbbbbbbeeeeeeebeebebbbeeeebbebeebbbbbeeeebebbbeebeeee: queryA 1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD:1146 :*********************************: 7c2l_B_1 1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD:1146 SecStr : STTEEE S SSS TT EE SSHHHH : ExpBur :ebbeeebeeeeebeeeeeeeeeebeeeeeeeee: |