#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [1066 aa] | Spike glycoprotein :SPIKE_SARS2 | |
2 | b | M 1 (A) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 801N 803S (identity: 100.0 %/93.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7bno_A_1 identity=93.8% |
queryA 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113 :********************************************************* **************************************: 7bno_A_1 45:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVXXXXXTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 144 SecStr : S B EEEE S EE SSS S EEEEEE SS EEEEEE ----- B EE SEEEEEEEESS EEEEESSSSSS: ExpBur :eeeebeeeeeeeeeebebebbbbbeeeeeeeeeeeeeeeebbbbbebebeebebebe-----ebbbbeeeeebeebbbbbbbbbbbbbbbbbbbeeeebe: queryA 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213 :****************************************************************************************************: 7bno_A_1 145:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 244 SecStr :S EEEEE SSEEEEEEEEEEE SS EEEEE SSSS EEEEEE SEEEEEEEEEEEEEEE S EEEEEEEEEETTEEEEE EEEE S: ExpBur :ebbbbbebbeeebbbebbbbebbebbbbbbebeeeeeebeeebeebeeeeeeeeeeeeeeeeeeebeeeeeebeebbbbbbbeeebebebbbbeeebeee: queryA 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313 :****************************************************************************************************: 7bno_A_1 245:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 344 SecStr :SS S EE EEEEEE S EEEE EEEE TTS SSSS EEEEEE EEEEEEEEE TT EEEEEESSS HHHHHHHHHT S SEEE: ExpBur :eebeeeeebbeeeeebebeeebeebbbbbbbbbeeeeebebeebbebbbbbbbbbebeeeebbbebeeebebeebbbbeeeebbebbeeeeeeebeebee: queryA 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413 :****************************************************************************************************: 7bno_A_1 345:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 444 SecStr :EEEE EEEB S B HHHHT S TTS EEEEE SEE HHHHS SEEEESSS TT SSSS BSEEEEEEEEE TTSTTTSSTT: ExpBur :ebeeeeeeeeeebebeeeeeeebebeebbeeeebbbbbebeeeebeebbbebeebeeeeeeebeebeeeeeeebbeeebbebbbbbbbbbbebbebbbee: queryA 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513 :****************************************************************************************************: 7bno_A_1 445:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 544 SecStr : SSHHHHTEE SS SEEEEEE SSSS TT S EE S SS TTEE S EE SSS SSSBTTEE EE TT STT EEEEEE: ExpBur :eeeebbeebbbbbeebebbbbbbebeeebbeeebbeebebbbebeeebeeeeebeeeeeeeeeeeebeeeeeebbeebbeebebeeeeeeeebbbbbbbb: queryA 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613 :****************************************************************************************************: 7bno_A_1 545:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 644 SecStr :EEE SS EE B S EEEEEETTEEEEEE EE S TT EEE TT EEEEE TTT EEE EEEEEE SSS EEEES: ExpBur :bbeeeeeeeebeeeeeeeeeeeeebbbbebeeeebebebeeeeeebeeeeeeeeeeeeeeebbbbbeeeebbebeeebeebbbbbbbbeeebeeebbbee: queryA 614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713 : *** ************************************ *************************: 7bno_A_1 645:GVNCXXXXXXXXXXXXXXXXXXXXXXXNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIA: 744 SecStr :S ----------------------- EEEETTEEEES EE S SEEEETTEEEES ------------ EEEE S SSEEE: ExpBur :ebee-----------------------eeeebeebbbeebeeeeeeeeeebebeeebbbbbee------------eeebbbbeebeeeeeeeeeeeeeee: queryA 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813 :****************************************************************************************************: 7bno_A_1 745:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 844 SecStr :EE EEEEEEEEEE EEEE SHHHH SS SHHHHTTGGGHHHHHHHHHHHHHHHHHHHHHHHHHS S S S SSS SSSS TTSSS: ExpBur :beeebebebeebebbbbbebbebebeebbbeebeebeeebeeeeeebeebeeebeebbebbeebbeebbbebeeeeeeeeeeebeebebeebbeeeebee: Contact : b b queryA 814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913 :************** **************************************************************: 7bno_A_1 845:KRSFIEDLLFNKVTXXXXXXXXXXXXXXXXXXXXXXXXAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 944 SecStr :S HHHHHHHHH ------------------------ GGGGTEEEE SS HHHHHHHHHHHHHHHHHTTTTTSSSS HHHHHHHHHHTTT T: ExpBur :ebbebbebbeeeee------------------------eeeeebbeeeeeebeeeebbeebbbbbbbbbebbeebeeeeeeeeebeebbbebbeebebee: queryA 914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013 :*************************** ****************************************** **************************: 7bno_A_1 945:NVLYENQKLIANQFNSAIGKIQDSLSSXXXALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLI:1044 SecStr :HHHHH HHHHHHHHHHHHHHHHHHHT --- SSSHHHHHHHHHHHHHHHGGG SS S S HHHHHHHS GGGGHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :ebbeeeeeebbeebeebbeebeeebee---eeeebeebeeebeebbeebeeeeeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebee: queryA 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113 :****************************************************************************************************: 7bno_A_1 1045:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1144 SecStr :HHHHHHHHHHHHHHHHHHHTSS STTSSSSSEEEEE EEETTEEEEEEEEEEE EEEEEEESEEESSSSEEEESSSEEEE SS EEEE TTS B: ExpBur :ebeebeebbeebbebbeebbeeebeeeebbbeeebbbbbbbbbbebbbbbbbbbeeeeeeebeebebbbeeeebbeeeebebbbeeeeeebbeeebeeee: queryA 1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD:1146 :*********************************: 7bno_A_1 1145:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD:1177 SecStr : TTSEEE S SSS SSEEE TTTGGG : ExpBur :ebbeeebeeeeebeebeeeeeeebeeeeeeeee: |