#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | B 1 (B) | polymer(polypeptide(L)) [1071 aa] | Spike glycoprotein :SPIKE_SARS2 | |
2 | b | H 1 (H) | branched(oligosaccharide) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 717N 719T 926Q 1071Q (identity: 100.0 %/94.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7bnn_B_1 identity=94.3% |
queryA 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113 :********************************************************* **************************************: 7bnn_B_1 45:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVXXXXXTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 144 SecStr : EE S B SS S EE EEEE SS EEE EE ----- EE EE S EEEEE SS EEEEEEESS SSS: ExpBur :eeeebeeeeeeeeeebebebbbbbebeeeeeeeeeeebeeebbbbeeebbbbebeee-----ebebebeebebeebbbbbbbbebebbbbbbbbeebeee: queryA 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213 :****************************************************************************************************: 7bnn_B_1 145:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 244 SecStr :S BEE SS EEE SS EEB SSSS BS S S S EEEE S B EEEEEE SS EEEEEE B S: ExpBur :ebbbbbbbbeeebebbbbebebbebbbbbbeeeeeeeebeeebeebeeeeeeeeeeeeeeeeeeebbeeeeebeebbbbbbbeeeeebbbbbeeeeeeee: queryA 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313 :****************************************************************************************************: 7bnn_B_1 245:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 344 SecStr :SS SS BEEEEEE EEEEEEEEB SSS TTT SB EEEEE EEEE EEE SSS EEEE TTS HHHHHHHHHTSS SEEE: ExpBur :ebbeeeebbbeeeeebebeeebeebbbbbbbbbbeebeeebbebbebbebbbbbbebeeeebbbebeeebebeebbbbeeeebbebbbeeeeeebeeeeb: queryA 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413 :****************************************************************************************************: 7bnn_B_1 345:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 444 SecStr :EEEE EEE STTTTSS S BSTT EEEEE SS STTTTSS SEEEESSS GGGTTT BSEEEEEEEEESGGGTTSSTT: ExpBur :ebeebeeeeeeebebeeeeeeebebeebbeeeebbbbbebeebebeebeebbeebeeeeeeeeeebeeeeeeebeebebbbbbbbbbbbbbebbeebbee: queryA 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513 :****************************************************************************************************: 7bnn_B_1 445:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 544 SecStr : SHHHHTT TT SEEEEEE SSSSS TT B S EEE SS TT S EE SSS SS SSTTEE SEEE B TTS TTTSEEEEEEE: ExpBur :eeeebbbebbbbbeebebbbbbbebeeebbeeebbeebbebeebeeebeeeeebeeeeebeeeeeebeeeeeebbeebbeebebeeebeebebbbbbbbb: queryA 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613 :****************************************************************************************************: 7bnn_B_1 545:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 644 SecStr : B SSSS S SSEEEEEETTEEEEEEEEE TT B SSS B EEEETTTTEEEEEE EEEEEE TTT EEET: ExpBur :bbeeeeeeeebebeeeeeeeeeeebbebebeebeeebebeebeeebeeeeeebeeeeeeeebbbbbeeeebbebeebbeebbbbbbbbeeebeeebbbbe: queryA 614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713 : ******* ************************************* *************************: 7bnn_B_1 645:GVNCTEVPXXXXXXXXXXXXXXXXXXSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIA: 744 SecStr :T TTS ------------------ B SS BS EE SS SEE SSS EEEEE ------------ EEEEE TT E: ExpBur :ebeeeeee------------------eeeeebeebbbeebeeeeeeeeeebebeeebbbbbee------------eeebbbbeeeeeeeeeeeeeeeeee: queryA 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813 :****************************************************************************************************: 7bnn_B_1 745:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 844 SecStr :EE EE EEEEEEE EEE SSTTTT S SHHHHHHGGG SSSSHHHHHHHHHHHHHHHHHHHHH SS S TT TTTS TTSSS: ExpBur :bbeebebebeeebbbbbbebbebebeebbbeebeebeebbeeeeeebeebeeebeebbeebeebbeebbeebeeeeeeeeeeebeebebeebbeeeeeee: Contact : b b queryA 814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913 :*************** **************************************************************: 7bnn_B_1 845:KRSFIEDLLFNKVTLXXXXXXXXXXXXXXXXXXXXXXXAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 944 SecStr : HHHHHHHTT ----------------------- GGGTEEE SS HHHHHHHHHHHHHHHHHHTTGGGSSS HHHHHHHHHHTTT S: ExpBur :eebebbbbbbeebee-----------------------eeeeebbeeeeeebeeeebbeebebbbbbbbebbeebeeeeeeeeebbebbbebbeebebee: queryA 914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013 :*************************** ************* **************************** **************************: 7bnn_B_1 945:NVLYENQKLIANQFNSAIGKIQDSLSSXXXALGKLQDVVNQNAXALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLI:1044 SecStr :HHHHHSHHHHHHHHHHHHHHHHHHHT --- HHHHHHHHHH - HHHHHHTTS TTSS S HHHHTSSS HHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :ebbeeeeeebbebbeebbeebeeebee---ebeebeebeeebe-ebeebeeebeeeeebeebebeebeeeeeeeebeebbeebbebbbebbeebbeebee: Contact : b queryA 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113 :****************************************************************************************************: 7bnn_B_1 1045:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1144 SecStr :HHHHHHHHHHHHHHHHHHHTTS STTTSSSSEEEEEEE TTEEEEEEEEEEE EEE SEEESSS EEESSSEEE SSSS EEE SSS B: ExpBur :ebeebeebbeebbebbeebbbbebeeeebbeeeebbbbbbbbbbebbbbbbbbbeeeeeeebeebebbbeeeebbeeeebbbbbeeeebebbbeebeeee: Contact : b queryA 1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD:1146 :*********************************: 7bnn_B_1 1145:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD:1177 SecStr : STTEEE S TTS SSEEE TTTTTT : ExpBur :ebbeeebeeeeeeeeeeeeeeeebeeeeeeeee: |