#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [1066 aa] | Spike glycoprotein :SPIKE_SARS2 | |
2 | b | D 1 (D) | branched(oligosaccharide) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 709N (identity: 100.0 %/93.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7bnn_A_1 identity=93.8% |
queryA 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113 :********************************************************* **************************************: 7bnn_A_1 45:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVXXXXXTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 144 SecStr : S B EEEE SS EE SS S EE EEEE TT EEEEEEEE ----- B EE S EEE SS EEEEE SSSSSS: ExpBur :eebebeeeeeeeeeebebeebbbbebeeeeeeeeeeebeeebbbbeeebbebebeee-----eebbbbeebebeebbbbbbbbebbbbbbbbbbbebebe: queryA 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213 :****************************************************************************************************: 7bnn_A_1 145:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 244 SecStr :S B B SS EEEEE SS EEB SSS EEE TT S EEEEEE SS S EEEEEE BTTEEEEEEEEE S: ExpBur :eebbbbbbebeeebbbbbebebbebbbbbbebeeeeeebeeeeebbeeeeeeeeeeeebeeeeeebeeeeeebebbebbbbbeeeeebbbbbbeeebeee: queryA 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313 :****************************************************************************************************: 7bnn_A_1 245:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 344 SecStr :SS S EEEEEEEEE S EEEEEE B TTS SSTTTS EEEE EE EEEE EEE TTS EEE SSSSHHHHHHHHHTSS EEEE: ExpBur :eebeeeeebbeeeeebebeeebeebbbbbbbebbeebeeebbebbbbbebbbbbbebeeeebbbebbeeeebeebbbbeeeebbebbbeeeeeebeebee: queryA 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413 :****************************************************************************************************: 7bnn_A_1 345:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 444 SecStr :EEEEE EEE B HHHHSSS TTS EEE SSB SGGGTTSS SEEEEETS GGGGGS EEEEE EEEESGGGTTSSSS: ExpBur :ebeebeeeeeeebebbeeeeeebebeebbeeeebebbeebeeeebeebebebeebeeeeebeeeebeeeeeeebbeebbbebbbbbbbbbbebbebbbbe: queryA 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513 :****************************************************************************************************: 7bnn_A_1 445:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 544 SecStr : HHHHHT B TT EEEEEEE TTTS SS B EE SS BT EE SSS SS TTEE SEE B TTS TTTSEEEEEEE: ExpBur :eebebbbebbebeeebbbbbbbbebbeebbeeebbeebebbeeeeeebeeeeeeeeeeeeeeeeeebeeeeeeebeebbeebebeeeeeeeebbbbbbbb: queryA 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613 :****************************************************************************************************: 7bnn_A_1 545:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 644 SecStr :EEE S S B SSEEEEEBTTB EE B SS TT B TTT BB B EEEEEEEE TTT EEEES: ExpBur :bbeeeeeeeebbbeeeeeeeeeeebbebbbbeeeeebebeebeeeeeeeeeeeeeeeeeeebbbbbeeeebbbbeebeebbbbbbbbbeeeeeebbbbee: queryA 614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713 : ****** ************************************ *************************: 7bnn_A_1 645:GVNCTEVXXXXXXXXXXXXXXXXXXXXNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIA: 744 SecStr :SS TT -------------------- EEE SSSEEES B S SEEEETTEEEES ------------ EEEE TT EE: ExpBur :ebeeeee--------------------eeeebeebbbeebeeeeeeeeeebebeeebbbbeee------------eeebbbbeeeeeeeeeeeeeeeeee: Contact : b queryA 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813 :****************************************************************************************************: 7bnn_A_1 745:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 844 SecStr : EEEEEEEEEEE EEEE HHHHHS S SHHHHHHGGG SSHHHHHHHHHHHHHHHHHHHHHHH SS S STT SSS TTSSS: ExpBur :bbeebebebeeebbbbbbebbbbebeebbbeebeebeebbeeeeeebeebeeebeebbeebbebbeebbeebeeeeeeeeeeebeebebeebbeeeeeee: queryA 814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913 :************** ***********************************************************: 7bnn_A_1 845:KRSFIEDLLFNKVTXXXXXXXXXXXXXXXXXXXXXXXXXXXFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 944 SecStr : HHHHHHHTT --------------------------- SEEEE SS HHHHHHHHHHHHHHHHHHTT SSSSS HHHHHHHHHHTTT H: ExpBur :ebbebbbbbeeeee---------------------------eeebeeeeeebeeeebbeebebbbbbbbebbeebeeeeeeeeebbebbbebbeebebee: queryA 914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013 :*************************** ****************************************** **************************: 7bnn_A_1 945:NVLYENQKLIANQFNSAIGKIQDSLSSXXXALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLI:1044 SecStr :HHHHT HHHHHHHHHHHHHHHHHHTT --- HHHHHHHHHHHHHHHHHHHGGG TTSS S HHHHHHHS GGGTHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :ebbeeeeeebbeebeebbeebbeebee---ebeebeebeeebeebbeebeeeeeeeeebebeebeebbeeeeeeebeebbeebbebbbebbeebbeebee: queryA 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113 :****************************************************************************************************: 7bnn_A_1 1045:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1144 SecStr :HHHHHHHHHHHHHHHHHHHTSS STTTSSSSEEEEEEEEEETTEEEEEEEEEEE EEEE S EESSSS EEESSSEEEESSSSEEEE TTS E: ExpBur :ebeebeebbeebbebbeebbbbebeeeebbbeeebbbbbbbbbeebbbbbbbbbeeeeeeebeebebbbeeeebbeeeebbbbbeeeebebbbebbeeee: queryA 1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD:1146 :*********************************: 7bnn_A_1 1145:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD:1177 SecStr :E SSSEEE S TTS SS EE THHHHH : ExpBur :ebbeeebeeeeeeeeeeeeeeeebeeeeeeeee: |