#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7bnn_A_1_D_1

Protein Model on 7bnn_A_1_D_1 (TEMPLATE: 7bnn )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [1066 aa] Spike glycoprotein :SPIKE_SARS2
2 b D 1 (D) branched(oligosaccharide) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 709N (identity: 100.0 %/93.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7bnn_A_1 identity=93.8%
queryA        14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113
                :*********************************************************     **************************************:
7bnn_A_1      45:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVXXXXXTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 144
SecStr          :      S B    EEEE SS  EE  SS    S EE  EEEE  TT EEEEEEEE  -----  B     EE  S EEE    SS  EEEEE  SSSSSS:    
ExpBur          :eebebeeeeeeeeeebebeebbbbebeeeeeeeeeeebeeebbbbeeebbebebeee-----eebbbbeebebeebbbbbbbbebbbbbbbbbbbebebe:    

queryA       114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213
                :****************************************************************************************************:
7bnn_A_1     145:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 244
SecStr          :S  B B   SS  EEEEE     SS   EEB  SSS    EEE TT    S EEEEEE            SS S EEEEEE  BTTEEEEEEEEE    S:    
ExpBur          :eebbbbbbebeeebbbbbebebbebbbbbbebeeeeeebeeeeebbeeeeeeeeeeeebeeeeeebeeeeeebebbebbbbbeeeeebbbbbbeeebeee:    

queryA       214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313
                :****************************************************************************************************:
7bnn_A_1     245:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 344
SecStr          :SS  S   EEEEEEEEE  S   EEEEEE   B TTS SSTTTS    EEEE EE  EEEE EEE  TTS   EEE SSSSHHHHHHHHHTSS   EEEE:    
ExpBur          :eebeeeeebbeeeeebebeeebeebbbbbbbebbeebeeebbebbbbbebbbbbbebeeeebbbebbeeeebeebbbbeeeebbebbbeeeeeebeebee:    

queryA       314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413
                :****************************************************************************************************:
7bnn_A_1     345:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 444
SecStr          :EEEEE      EEE       B   HHHHSSS    TTS   EEE SSB  SGGGTTSS  SEEEEETS GGGGGS   EEEEE  EEEESGGGTTSSSS:    
ExpBur          :ebeebeeeeeeebebbeeeeeebebeebbeeeebebbeebeeeebeebebebeebeeeeebeeeebeeeeeeebbeebbbebbbbbbbbbbebbebbbbe:    

queryA       414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513
                :****************************************************************************************************:
7bnn_A_1     445:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 544
SecStr          :   HHHHHT B  TT  EEEEEEE TTTS  SS B    EE   SS   BT        EE SSS  SS   TTEE SEE   B TTS TTTSEEEEEEE:    
ExpBur          :eebebbbebbebeeebbbbbbbbebbeebbeeebbeebebbeeeeeebeeeeeeeeeeeeeeeeeebeeeeeeebeebbeebebeeeeeeeebbbbbbbb:    

queryA       514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613
                :****************************************************************************************************:
7bnn_A_1     545:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 644
SecStr          :EEE S S    B          SSEEEEEBTTB   EE  B      SS      TT      B TTT  BB  B    EEEEEEEE TTT    EEEES:    
ExpBur          :bbeeeeeeeebbbeeeeeeeeeeebbebbbbeeeeebebeebeeeeeeeeeeeeeeeeeeebbbbbeeeebbbbeebeebbbbbbbbbeeeeeebbbbee:    

queryA       614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713
                : ******                    ************************************            *************************:
7bnn_A_1     645:GVNCTEVXXXXXXXXXXXXXXXXXXXXNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIA: 744
SecStr          :SS TT  -------------------- EEE SSSEEES B  S     SEEEETTEEEES  ------------    EEEE            TT EE:    
ExpBur          :ebeeeee--------------------eeeebeebbbeebeeeeeeeeeebebeeebbbbeee------------eeebbbbeeeeeeeeeeeeeeeeee:    
Contact         :                                                                                               b    

queryA       714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813
                :****************************************************************************************************:
7bnn_A_1     745:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 844
SecStr          :    EEEEEEEEEEE    EEEE HHHHHS S SHHHHHHGGG SSHHHHHHHHHHHHHHHHHHHHHHH   SS     S   STT    SSS  TTSSS:    
ExpBur          :bbeebebebeeebbbbbbebbbbebeebbbeebeebeebbeeeeeebeebeeebeebbeebbebbeebbeebeeeeeeeeeeebeebebeebbeeeeeee:    

queryA       814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913
                :**************                           ***********************************************************:
7bnn_A_1     845:KRSFIEDLLFNKVTXXXXXXXXXXXXXXXXXXXXXXXXXXXFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 944
SecStr          :   HHHHHHHTT  ---------------------------  SEEEE  SS HHHHHHHHHHHHHHHHHHTT SSSSS     HHHHHHHHHHTTT  H:    
ExpBur          :ebbebbbbbeeeee---------------------------eeebeeeeeebeeeebbeebebbbbbbbebbeebeeeeeeeeebbebbbebbeebebee:    

queryA       914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013
                :***************************   ******************************************  **************************:
7bnn_A_1     945:NVLYENQKLIANQFNSAIGKIQDSLSSXXXALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLI:1044
SecStr          :HHHHT HHHHHHHHHHHHHHHHHHTT ---  HHHHHHHHHHHHHHHHHHHGGG  TTSS S HHHHHHHS GGGTHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :ebbeeeeeebbeebeebbeebbeebee---ebeebeebeeebeebbeebeeeeeeeeebebeebeebbeeeeeeebeebbeebbebbbebbeebbeebee:    

queryA      1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113
                :****************************************************************************************************:
7bnn_A_1    1045:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1144
SecStr          :HHHHHHHHHHHHHHHHHHHTSS   STTTSSSSEEEEEEEEEETTEEEEEEEEEEE    EEEE S EESSSS EEESSSEEEESSSSEEEE TTS   E:    
ExpBur          :ebeebeebbeebbebbeebbbbebeeeebbbeeebbbbbbbbbeebbbbbbbbbeeeeeeebeebebbbeeeebbeeeebbbbbeeeebebbbebbeeee:    

queryA      1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD:1146
                :*********************************:
7bnn_A_1    1145:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD:1177
SecStr          :E  SSSEEE S TTS SS EE     THHHHH :    
ExpBur          :ebbeeebeeeeeeeeeeeeeeeebeeeeeeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123