[pdbjlvh2]Protein Model on 6zgi_C_1_B

#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 6zgi_C_1_B_1

Protein Model on 6zgi_C_1_B_1 (TEMPLATE: 6zgi )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(queryA)	C 1 (C)	polymer(polypeptide(L)) [1098 aa]	Spike glycoprotein :SPIKE_SARS2
2	b		B 1 (B)	polymer(polypeptide(L)) [1098 aa]	Spike glycoprotein :SPIKE_SARS2	41K 42V 43F 113K 115Q 198D 199G 200Y 225P 230P 231I 232G 234N 365Y 369Y 370N 373S 374F 375S 377F 384P 427D 737D 739T 740M 744G 745D 755Q 756Y 758S 759F 762Q 765R 776K 786K 787Q 788I 789Y 790K 796D 797F 833F 834I 835K 836Q 837Y 841L 842G 843D 846A 854K 855F 857G 863P 864L 866T 869M 872Q 873Y 883T 893A 894L 895Q 896I 897P 898F 900M 904Y 913Q 914N 917Y 918E 920Q 921K 966L 975S 976V 978N 979D 981L 982S 983R 984L 985D 988E 994D 1005Q 1019R 1030S 1031E 1039R 1141L 1144E 1145L (identity: 100.0 %/96.7 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:6zgi_C_1 identity=96.7%

queryA        14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113
                :*********************************************************     **************************************:
6zgi_C_1      45:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVXXXXXTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 144
SecStr          :             EEEEESS   B  SS    SEEEEEEEEE  TTEEEEEEEE   -----       EEE SS EEEEEEESS    EEEEESS SSS:    
ExpBur          :eeeebeeeeeeeeeebebeebbbbbbeeeeeeeeeeebeeebbbbeeebebbebeee-----ebbbbbeebebeebbbbbbbbbbebbbbbbbbeebeee:    
Contact         :                           bbb                                                                     b

queryA       114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213
                :****************************************************************************************************:
6zgi_C_1     145:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 244
SecStr          :S EEEEEE SS EEEEEE EEEEEEEEEEEEEETTTTEEEEEEEEEEEEE    EEEE            SSEEEEEEEEEEEETTEEEEEEEEEEEEES:    
ExpBur          :eebbbbbeebebebbbbbebebbebbbbbbebeeeeeeeeeebeebeeeeeeeeeeeeeeeeeeebeeeeeebeebebbbbbeeeeebebbbeeeebebe:    
Contact         : b                                                                                  bbb             

queryA       214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313
                :****************************************************************************************************:
6zgi_C_1     245:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 344
SecStr          :SS       BEEEEEEE      EEEEE EEEE TTS S TTT  B   EEEEEEE EEEEEEEEE TTS EEEEEETTS HHHHHHHHHTSS   SEEE:    
ExpBur          :eebeeeeebbeeeeebebebebeebbbbbbbbbbeebeeeebebbebeebbbbbbebeebebbbebeeebebeebbbbeeebbbebbbeeeebebeebee:    
Contact         :           b    bbb b                                                                               

queryA       314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413
                :****************************************************************************************************:
6zgi_C_1     345:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 444
SecStr          :E         EEEEE     SB  TTTTSS S   BSTT EEEEE S B  GGGGTTT   SEEEEESS GGGGGG  EEEEEEEEEEEEGGGGGGSSTT:    
ExpBur          :ebeebeeeeeeebbbbeeeeeebebeebbeeeebebbeebeeeebeebbbeeeebeeeeeeeeeebeebeeeebeebbbbebebbbbbbbbebbebbbee:    
Contact         :                                                   b   bb  bbb b      b                             

queryA       414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513
                :****************************************************************************************************:
6zgi_C_1     445:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 544
SecStr          :  SHHHHHT    SS  EEEEEEE HHHH  SS B   EEE   SS   TT        EE SSS  SS   TTEE SEEE  B SS  GGGSEEEEEEE:    
ExpBur          :eeeebbbebbebbeebebbbbbbebbeebbeeebbeebebbeebeeebeeeeebeeeeeeeeeeeebeeeeeeebeebbeebebeeeeeeeebbbbbbbe:    
Contact         :             b                                                                                      

queryA       514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613
                :****************************************************************************************************:
6zgi_C_1     545:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 644
SecStr          :EEEESSS  S   S        SS EEEEETTEEEEEEEEE      TT  EEE TT  EEEEE TTT  EEEEE S    EEEEES TTT S  EEEET:    
ExpBur          :bbebeeeebebbbeeeeeeeeeeebbebbbbbbeeebbbeebeeebeeeebbbeeeeeebebbbbbeeeebbebeebeebbbbbbbbbbeeeeeebbbbe:    

queryA       614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713
                :****               ********************************************            *************************:
6zgi_C_1     645:DVNCXXXXXXXXXXXXXXXWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIA: 744
SecStr          :T   ---------------   S   S EEEETTEEEES EE S     SEEEETTEEEEEE ------------  EEEEEE            SS EE:    
ExpBur          :ebee---------------eebeeeeeeeeebeebbbbebeebeeeeeeebebeeebbbbeee------------eeebbbbeeeeeeeeeeeeeeeeee:    

queryA       714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813
                :****************************************************************************************************:
6zgi_C_1     745:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 844
SecStr          :EE  EEEEEEEEEEE    EEEE HHHHHTTT HHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHH S        SS  STT   TTTS  TTSSS:    
ExpBur          :bbeebebebeeebbbbbbebbebebeebbbeebeebeeebeeeeeebeebeeebeebbeebeebbeebbbebeeeeeeeeeeebeebebeebbeeeeeeb:    
Contact         :                       b bb   bb         bb bb  b  b          b         bbbbb     bb                

queryA       814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913
                :****************************************************************************************************:
6zgi_C_1     845:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 944
SecStr          :   HHHHHHHTSS  S S S   TTTS SSSTTTSHHHHHHTTTEEEE  SS HHHHHHHHHHHHHHHHHHTTGGGTSS     HHHHHHHHHHTTT  H:    
ExpBur          :ebbebbbbbbeebeeeeeeeeeeeeebeeeebeeeebbbbeeebbeeeeeeeeeeebbebbebbbbbbbebbeebeeeeeeeeebbebbbebbeebebee:    
Contact         :                   bbbbb   bbb  b       bb b     bb b  b  bb         b         bbbbbb b   b        b

queryA       914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013
                :***************************   ******************************************  **************************:
6zgi_C_1     945:NVLYENQKLIANQFNSAIGKIQDSLSSXXXALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLI:1044
SecStr          :HHHHHTHHHHHHHHHHHHHHHHHHH  ---  HHHHHHHHHHHHHHHHHHHGGG  TTSS S HHHHHSSS HHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :ebbeeeeeebbeebeebbeebeeebee---ebeebbebbeebeebbbebeeebeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebee:    
Contact         :b  bb bb                                            b        bb bb bbbbb  b     b          b        

queryA      1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113
                :****************************************************************************************************:
6zgi_C_1    1045:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1144
SecStr          :HHHHHHHHHHHHHHHHHHHTSS   STTTTSSSEEEEEEEEEETTEEEEEEEEEEE  EEEEEEES EESSS EEEESSSEEEESSS EEEEETTEEEEE:    
ExpBur          :ebeebeebbeebbebbeebbbbebeeeebbeeeebbbbbbbbbbebbbbbbbbbeeeeeeebeebebbbeeeebbeeeebbbbbeeeebebbbeebeeee:    
Contact         :     b          bb       b                                                                          

queryA      1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD:1146
                :*********************************:
6zgi_C_1    1145:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD:1177
SecStr          :   TTTEEE S SSS TT EE     TTHHHH :    
ExpBur          :ebbeeebeeeeebeeeeeeeeeebeeeeeeeee:    
Contact         :                           b  bb

Protein Model on 6zgi_C_1_B_1 (TEMPLATE: 6zgi )

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