[pdbjlvh2]Protein Model on 6zgh_C_1_A

#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 6zgh_C_1_A_1

Protein Model on 6zgh_C_1_A_1 (TEMPLATE: 6zgh )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(queryA)	C 1 (C)	polymer(polypeptide(L)) [1080 aa]	Spike glycoprotein :SPIKE_SARS2
2	b		A 1 (A)	polymer(polypeptide(L)) [875 aa]	Spike glycoprotein :SPIKE_SARS2	314Q 317N 319R 355R 381G 382V 383S 390L 396Y 463P 464F 465E 466R 471E 517L 518L 545G 546L 547T 557K 559F 562F 563Q 564Q 565F 566G 567R 568D 569I 571D 572T 589P 591S 592F 613Q 614D 646R 665P 668A 669G 697M 699L 700G 701A 702E 703N 704S 705V 707Y 708S 712I 713A 715P 957Q 961T 965Q 968S 970F 971G 995R 1002Q 1003S 1006T 1010Q 1013I 1039R 1040V 1041D 1045K 1046G 1072E 1074N 1077T 1079P 1089F 1090P 1094V 1121F 1123S 1128V 1130I 1145L (identity: 100.0 %/95.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:6zgh_C_1 identity=95.1%

queryA        14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113
                :*********************************************************     **************************************:
6zgh_C_1      45:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVXXXXXTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 144
SecStr          :             EEE  SS  EE    S   S EEEEEEEE  TT  EEEB  B  -----       EEE  S EEEEEEESS  EEEEEEESS SSS:    
ExpBur          :eeeebeeeeeeeeeebebeebbbbbeeeeeeeeeeeeeeeebbbbeeebebbebeee-----ebbbbbeeeebeebbbbbbbbebebbbbbbbbeeeeee:    

queryA       114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213
                :****************************************************************************************************:
6zgh_C_1     145:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 244
SecStr          :S EEEEEE SS EEEEEEEEEEEEEEEEEEEE SSS  EEEEEEEEEEEEEEEEEEEE            SSB EEEEEEEEEETTEEEEEEEEE   B :    
ExpBur          :eebbbbbbebeeeebbbbebebbebbbbbbebeeeeeebeeebeebeeeeeeeeeeeeeeeeeeebeeeeeebeebbbbbbbeeeeebebbeeeeebeee:    

queryA       214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313
                :****************************************************************************************************:
6zgh_C_1     245:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 344
SecStr          :SS   S  EE EEEEE   S   EEEEEEEEEE TT SSSTTTS    BEEEEEEE EEEEEEEEE TTSSEEEEEESSS HHHHHHHHHT S   SEEE:    
ExpBur          :eebbeeeebbeeeeebebebebeebbbbbbbbbeeebeeeebebbebbbbbbbbbebeeeebbbebbeebebeebbbbeeebbbebbbeeeeeebeeeee:    

queryA       314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413
                :****************************************************************************************************:
6zgh_C_1     345:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 444
SecStr          :EEEE       B  B      B   STTTS S    STT   EEE SSB  GGGSTTT   SEEEEESS GGGTTS   EEEEEEEEEE SSSGGGSSSS:    
ExpBur          :eeeebeeeeeeebebbbeeeeebebeebbeeeebbbbbebeeeebeebbbeeeebeeeeeeeeeebeebeeeebeeebbbbbebbbbbbbeebeebbeee:    
Contact         :b  b b                                   b                         bbb      b     b                 

queryA       414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513
                :****************************************************************************************************:
6zgh_C_1     445:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 544
SecStr          :  SSHHHHT    TT  EEEEEEE HHHH  SS     EEE   SS   SS           SSS SSSS  TT   SEEE    TTS STTS EEEEEE:    
ExpBur          :eeeebbeebbbbbeebebbbbbbebbeebbeeebeeebebbeebeeebeeeeeeeeeebeeeeeeebeeeeeebbeebbeebebeeeeeeeebbbbbbbb:    
Contact         :                                                 bbbb    b                                          

queryA       514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613
                :****************************************************************************************************:
6zgh_C_1     545:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 644
SecStr          :EEESSSS  S   S        SSEEEEEETTEEEEEEEEE S    TT  EEE TTSSEEEEE TTT  EEEEE S   EEEEEES TTT    EEEES:    
ExpBur          :bbeeeeeebebbbbeebeeebeeebbebbbbbeeeebbbeebeeeeeeeebebeeeeeeebbbbbeeeebbbebeebeebbbbbbbbbbeeeeeebbbbe:    
Contact         :   bb                          bbb         b b  bbbbbbbb bb                b bb                    b

queryA       614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713
                :****               ********************************************            *************************:
6zgh_C_1     645:DVNCXXXXXXXXXXXXXXXWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIA: 744
SecStr          :S   ---------------   S   S EEEETTEEEES EE S     SEE SSSEEE    ------------  S EEEE   S        SSEEE:    
ExpBur          :ebee---------------eebeeeeeeeeebebbbbbebeeeeeeeeeebebeeebbbbbee------------eeebbbbeeeeeeeeeeeeeeeeee:    
Contact         :b                               b                  b  bb                           b bbbbbbb bb   bb

queryA       714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813
                :****************************************************************************************************:
6zgh_C_1     745:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 844
SecStr          :EE  EEEEEEEEEEE    EEE  HHHHH SS SHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHT   SS     S   SSS   TTSS  TTSSS:    
ExpBur          :beeebebebeeebbbbbbebbebebeebbbeebeebeeebeeeeeebeebeeebeebbeebeebbeebbbebeeeeeeeeeeebeebebebbeeeeeeeb:    
Contact         : b                                                                                                  

queryA       814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913
                :*************                  *********************************************************************:
6zgh_C_1     845:KRSFIEDLLFNKVXXXXXXXXXXXXXXXXXXAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 944
SecStr          :S  HHHHHHHHH ------------------  SSHHHHHHTTT EEE  SS HHHHHHHHHHHHHHHHHTTTSTTSSS     HHHHHHHHHHHHT  H:    
ExpBur          :ebbebbbebeeee------------------eeeeeeeebeeebbeeeeeebeeeebbeebbbbbbbbbebbebbeeeeeeebebeebbbebbeeeebee:    

queryA       914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013
                :***************************   ******************************************  **************************:
6zgh_C_1     945:NVLYENQKLIANQFNSAIGKIQDSLSSXXXALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLI:1044
SecStr          :HHHHHSHHHHHHHHHHHHHHHHHHHH ---  STTTHHHHHHHHHHHHHHHGGG  SSSS S HHHHHTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :ebbeeeeeebbebbeebbeebeeebee---ebeebeebeeebeebeeebeeebeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebee:    
Contact         :                                           b   b   b  b bb                       b      bb  b   b  b

queryA      1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113
                :****************************************************************************************************:
6zgh_C_1    1045:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1144
SecStr          :HHHHHHHHHHHHHHHHHHTTSS    TTSSSSSEEEEEEEEEETTEEEEEEEEEEE  EEEEEEES EE SSBEEEESS EEEESSS EEEE SSS   B:    
ExpBur          :bbeebeebbeebbebbeebbbbebeeeebbeeeebbbbbbbbbbebbbbbbbbbeeeeeeebeebebbbeeeebbeeeebbbbbeeeeeebbbeebebee:    
Contact         :                         bbb   bb                         b b  b b         bb   b                   

queryA      1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD:1146
                :*********************************:
6zgh_C_1    1145:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD:1177
SecStr          :   TTSEE  SBSTT SS EE     TTHHHH :    
ExpBur          :ebbeeebeeeeebeeeeeeeebebeeeeeeeee:    
Contact         :       b b    b b              b

Protein Model on 6zgh_C_1_A_1 (TEMPLATE: 6zgh )

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