#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 6xm4_C_1_P_1

Protein Model on 6xm4_C_1_P_1 (TEMPLATE: 6xm4 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) C 1 (C) polymer(polypeptide(L)) [1048 aa] Spike glycoprotein :SPIKE_SARS2
2 b P 1 (P) branched(oligosaccharide) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 338F 339G 343N (identity: 100.0 %/93.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6xm4_C_1 identity=93.3%
queryA        27:AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNV: 126
                :*******************************************          ***********************************************:
6xm4_C_1      14:AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHXXXXXXXXXXDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNV: 113
SecStr          :  EEE S  EE  SS   SS EEEEEEEE  TTEEE  B    ----------     B SSEEEEEE  SSS EEEEEEES  SSSS  EEEEE SSSE:    
ExpBur          :eeeebbebbbbbeeeeebeeeeeebeebbbbbebebeebeeee----------ebeebebeebbbbbbbbeeeebebbbbbeebeeeeebbbbeeeeeee:    

queryA       127:VIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPL: 226
                :*****************               **************             *****************************************:
6xm4_C_1     114:VIKVCEFQFCNDPFLGVXXXXXXXXXXXXXXXVYSSANNCTFEYVSXXXXXXXXXXXXXFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPL: 213
SecStr          :EEE       SS     ---------------      S   EEE -------------     EEEEE  TT EEEEEE    S SS   SS  EEEEE:    
ExpBur          :bbbbbbbebeeebeebe---------------eeeeeeeeeeeeee-------------eeebebbbbbeeeeebebbeeeeebeeeeebeeeebbbeee:    

queryA       227:VDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESI: 326
                :*************************            ***************************************************************:
6xm4_C_1     214:VDLPIGINITRFQTLLALHRSYLTPXXXXXXXXXXXXAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESI: 313
SecStr          :EEE       EEEEEE  SS     ------------ EEEEE EEEEEEEEE SSS EEEEEETTSSHHHHHHHHTTSS   SEEEEEEEEE    EE :    
ExpBur          :eebebeeebeebbbbbbeeeeeebe------------ebbbbebeebebbbebeeeeebeebbbbebbbbbbbbbeeeebebeeeebebeebeeeeeeeb:    

queryA       327:VRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLP: 426
                :****************************************************************************************************:
6xm4_C_1     314:VRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLP: 413
SecStr          : B     SB   HHHHT S    SSS EEEEE SSB   TTTSSSSS SEEE SSS GGGGGG  EEEEEEEEEEE SS TTSSSSS  STTTTTT    :    
ExpBur          :bbbeeeeeebebeebbeeeebebbebbeeeebeebbbebeebeeeeeeeeeebeebeeeebbeebbbebebbbbbbebebeebbeeeeebebbbbbbebe:    
Contact         :           bb   b                                                                                   

queryA       427:DDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCG: 526
                :******************  ********************************************************************************:
6xm4_C_1     414:DDFTGCVIAWNSNNLDSKXXGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCG: 513
SecStr          :SS  S EEEEE  SSS  --     EEE   SS   TT        EESSSS  SS   SSEE SEEE    TT  TTSS EEEEE EEEESSS  SBB :    
ExpBur          :eebebbbbbbebeeebbe--ebeebebbbebeeebeeeeeeeeeeeeeeeeeebeeeeeeebeebbeebebeeeeeebebbbbbbbbbbeeeebebebbb:    

queryA       527:PKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPVAIHA: 626
                :****************************************************************************************************:
6xm4_C_1     514:PKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPVAIHA: 613
SecStr          :S        SS EE BBSS B  BEEEE      TT  EEE TTS EEEEE SSS  EEEEE   EEEEEEEE  TTT    EEEEET  TTSHHHHTTT:    
ExpBur          :eeeeeeeeeeebbebbbbbbeeebebeebeeebeeeebbeeeeeeeeebbbbbeeeebbebeeeeebbbbbbbbbeeebeebbbbbeebebeebeebbee:    

queryA       627:DQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEI: 726
                :**************************************************            **************************************:
6xm4_C_1     614:DQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEI: 713
SecStr          :TTS TTTTGGG SS EEE SSEEEES EE S     SEEEETTEEEEEE ------------  EEEEEE            TTEEEEEEEEEEEEEEEE:    
ExpBur          :eeebeebeebbeeeeebebeebbbbebeeeeeeeeeebebeeebbbbeee------------eeebbbbeeeeeeeeeeeeeeeeeebbeebebebeeeb:    

queryA       727:LPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKV: 826
                :****************************************************************************************************:
6xm4_C_1     714:LPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKV: 813
SecStr          :EE     EEE HHHHHSTT HHHHTTGGGG SHHHHHHHHHHHHHHHHHHHHHHHH   SS     SS  STT   TTTS  SSSSS   HHHHHHTTS :    
ExpBur          :bbbbbbbbebebeebbbeebeebeebbeeeeeebeebeeebeebbeebbebbeebbbebeeeeeeeeeeebeebebeebbeeeeeeeebbebbbbbbeeb:    

queryA       827:TLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQ: 926
                :***************         ****************************************************************************:
6xm4_C_1     814:TLADAGFIKQYGDCLXXXXXXXXXCAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQ: 913
SecStr          : S SS STTGGGGT ---------    SSSEEE   SS HHHHHHHHHHHHHHHHHHTTSTTSSS     HHHHHHHHHHTTT  SHHHHHSHHHHHHH:    
ExpBur          :ebeeebbbeebeeee---------eeeeeebbeeeeeebeeeebbebbebbbbbbbebbeebeeeeeeeeebbebbbebbeebebeeebbeeeeeebbee:    

queryA       927:FNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAA:1026
                :***********************************************************  ***************************************:
6xm4_C_1     914:FNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAA:1013
SecStr          :HHHHHHHHHHHHHSS    HHHHHHHHHHHHHHHHHHHTTS  TTSS S GGGTTTSS TTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :beebbeebeeebeeeeeebeebbebbeebbebbeebeeebeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebeebbeebeebbeebb:    

queryA      1027:TKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNC:1126
                :****************************************************************************************************:
6xm4_C_1    1014:TKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNC:1113
SecStr          :HHHHHHTSS   STTTSSSSEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEES EESSSEEEEESSSEEEESSSSEEEE SSS   B  BTTTEEEEEET:    
ExpBur          :ebbeebbbebbeeeebbeeeebbbbbbbbbeebbbbbbbbbeebeeeebeebebbbeeeebbeeeebebbbeeeebbbbbeebeeeeebbeeebeeeeee:    

queryA      1127:DVVIGIVNNTVYDPLQPELDS:1147
                :*********************:
6xm4_C_1    1114:DVVIGIVNNTVYDPLQPELDS:1134
SecStr          :TSSTT EE   B SSSTT   :    
ExpBur          :eeeeeeeeeebeeeeeeeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123