#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 6xm3_C_1_D_1

Protein Model on 6xm3_C_1_D_1 (TEMPLATE: 6xm3 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) C 1 (C) polymer(polypeptide(L)) [1047 aa] Spike glycoprotein :SPIKE_SARS2
2 b D 1 (D) branched(oligosaccharide) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 457R 459S 460N 462K 465E (identity: 100.0 %/93.2 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6xm3_C_1 identity=93.2%
queryA        27:AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNV: 126
                :*******************************************          ***********************************************:
6xm3_C_1      14:AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHXXXXXXXXXXDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNV: 113
SecStr          : EE  SS   B  SS    S EEEEEEEE  SS  EEEE    ----------    EE SS EEEEE  SS  EEEEE  SS SSSS   EEEE SS E:    
ExpBur          :eebebbbbbbbbeeeeebeeeeeebeebbbbbeeebeebeeee----------eeeebebeebbbbbbbbeeeebebbbbbeeeeeeeebbbbbeeeeee:    

queryA       127:VIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPL: 226
                :*****************               **************             *****************************************:
6xm3_C_1     114:VIKVCEFQFCNDPFLGVXXXXXXXXXXXXXXXVYSSANNCTFEYVSXXXXXXXXXXXXXFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPL: 213
SecStr          :EEEES     SS     ---------------      S  EEEE -------------   EEEEEEEEETTEEEEEEEEE   SSSS  S    BEEE:    
ExpBur          :ebbbbbbeeeeebbbee---------------eeebeeeeeeeeee-------------eeebebbbbbeeeeebbbbbeeeebeeeeebbeeeebbeee:    

queryA       227:VDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESI: 326
                :*************************            ***************************************************************:
6xm3_C_1     214:VDLPIGINITRFQTLLALHRSYLTPXXXXXXXXXXXXAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESI: 313
SecStr          :EEE       EEEEEE  SS     ------------ EEEEE EEEEEEEEE TTS EEEEEETTSSHHHHHHHHTTSS   SEEEEEEEEE       :    
ExpBur          :eebebebebeebbbbbeeeeeeeee------------ebbbbebeeeebbbebeeebebeebbbbebbbbbbbbbeeeeeebeebeeebeebebeeeeeb:    

queryA       327:VRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLP: 426
                :****************************************************************************************************:
6xm3_C_1     314:VRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLP: 413
SecStr          : B         THHHHS S   BGGG EEEEE S B  THHHHS SS SEEEESSS GGGGGG  EEEEEEEEEEE STTGGGSSSS  SSHHHHT    :    
ExpBur          :bbbeeeeeebebeebbeeeebebbeebeeeebeebebebeebeeeeebebbebeebeeeebbeebbbebebbbbbbebebeebbbeeeeeebbbebbbbb:    

queryA       427:DDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCG: 526
                :******************  ********************************************************************************:
6xm3_C_1     414:DDFTGCVIAWNSNNLDSKXXGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCG: 513
SecStr          :SS  SEEEEEE STTT  -- B   EEE   SS   TT        EE SS   SS  STTEE SEEE  B TTS TTSS EEEEEEEEEESSS   BB :    
ExpBur          :eebebbbbbbebeeebbe--beeebeebeebeeebeeeeeeeeeebeeeeeeebeeeeeeebeebbebbbbeeeeeebebbbbbbbbbbeeeeeeeebbb:    
Contact         :                              b bb b  b                                                             

queryA       527:PKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPVAIHA: 626
                :****************************************************************************************************:
6xm3_C_1     514:PKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPVAIHA: 613
SecStr          :S        SSEEEEEETTEEEEEEEEE      TT   EE TTS EEEEE SSS  EEEEE   EEEEEEEES TTT S  EEEEET  TTSHHHHTTG:    
ExpBur          :eeeeeebeeeebbebbbbbbeeebebeebeeebeeeebbbeeeeeeeebbbbbeeeebbebeebeebbbbbbbbbeeebeebbbbbeebeeeebeebbeb:    

queryA       627:DQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEI: 726
                :**************************************************            **************************************:
6xm3_C_1     614:DQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEI: 713
SecStr          :GGS HHHHSTT SS EEE SSEEEES EE S     SEEEETTEEEEEE ------------  EEEEEE            SSEEEEEEEEEEEEEEEE:    
ExpBur          :eeebeebeeebeeeeebebebbbbbebeebeeeeeeebebeeebbbbeee------------eeebbbbeeeeeeeeeeeeeeeeeebbeebebebeeeb:    

queryA       727:LPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKV: 826
                :****************************************************************************************************:
6xm3_C_1     714:LPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKV: 813
SecStr          :EE    EEEE HHHHHSTT TTTTTTGGGG SSSHHHHHHHHHHHHHHHHHHHHHT   SS     S   STT   TTTS  SSSSS   SHHHHHHTT :    
ExpBur          :bbbbbbbbebebeebbbeebeebeebbeeeeeebeebeeebeebbeebeebbeebbeebeeeeeeeeeeebeebebeebbeeeeeeeebbebbbbbbebb:    

queryA       827:TLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQ: 926
                :**************          ****************************************************************************:
6xm3_C_1     814:TLADAGFIKQYGDCXXXXXXXXXXCAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQ: 913
SecStr          :   S SSHHHHT  ----------    STTEEEE  SS HHHHHHHHHHHHHHHHHHTTGGGSSS     HHHHHHHHHTTTT  THHHHHTHHHHHHH:    
ExpBur          :ebeeebbbeebeee----------eeeeeebbebeeeebeeeebbeebebbbbbbbebbeebeeeeeeeeebbebbbebbeebebeeebbeeeeeebbee:    

queryA       927:FNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAA:1026
                :***********************************************************  ***************************************:
6xm3_C_1     914:FNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAA:1013
SecStr          :HHHHHHHHHHHHHSSS S HHHHHHHHHHHHHHHHHHHGGG  TTSS S HHHHHTTS GGGSTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :beebbeebbeebeeeeeebeebbebbeebbebbeebeeebeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebeebbeebeebbeebb:    

queryA      1027:TKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNC:1126
                :****************************************************************************************************:
6xm3_C_1    1014:TKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNC:1113
SecStr          :HHHHHTTSS   STTTSSSSEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEES EESSSSEEEESSSEEEESSS EEEE TTS   B  BTTTEEE S T:    
ExpBur          :ebbeebbbbbbeeeebbeeeebbbbbbbbbbebbbbbbbbbeeeeeeebebbebbbeeeebbebeebbbbbeeeebbbbbebbeeeeebbeeebeeeeeb:    

queryA      1127:DVVIGIVNNTVYDPLQPELDS:1147
                :*********************:
6xm3_C_1    1114:DVVIGIVNNTVYDPLQPELDS:1134
SecStr          :TSSTT EE   B SSSSS   :    
ExpBur          :eeeeeeeeeebeeeeeeeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123