#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 6xf5_A_1_EA_1

Protein Model on 6xf5_A_1_EA_1 (TEMPLATE: 6xf5 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [1009 aa] Spike glycoprotein :SPIKE_SARS2
2 b EA 1 (B) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose 558K (identity: 100.0 %/89.4 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6xf5_A_1 identity=89.4%
queryA        27:AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNV: 126
                :*******************************************          ***********************************************:
6xf5_A_1      16:AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHXXXXXXXXXXDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNV: 115
SecStr          : EEEE S   B SSS    S EEEEEEEE  SSEEEEEE    ----------    EE SS EEEEEEESS  EEEEEEESS SSSS  EEEEE SS E:    
ExpBur          :eebebeebbbbebeeeebeeeeeebebebbbbeeebbbbeeee----------ebeebebeebbbbbbbbeeebbebbbbbbebeeeebbbbbeeeeeee:    

queryA       127:VIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPL: 226
                :*****************                     ********             *****************************************:
6xf5_A_1     116:VIKVCEFQFCNDPFLGVXXXXXXXXXXXXXXXXXXXXXNCTFEYVSXXXXXXXXXXXXXFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPL: 215
SecStr          :EEE S     SS  EE ---------------------    EEE -------------  EEEEEEEEEETTEEEEEEEEEE    SS       BEEE:    
ExpBur          :bbebbeeebeeebeeee---------------------eeeeeeee-------------beebebbbbbeeeeebbbbbeeeebeeeebbbeeeebbeee:    

queryA       227:VDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESI: 326
                :*******************                 ****************************************************************:
6xf5_A_1     216:VDLPIGINITRFQTLLALHXXXXXXXXXXXXXXXXXAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESI: 315
SecStr          :EEE       EEEEEEEE -----------------  EEE   EEEEEEEEE TTS EEEEEETTT HHHHHHHHTTSS   SEEEEEEEEE    SEE:    
ExpBur          :eebebebebeebbbbbbee-----------------bbbbbbebeeeebbbebeeebebeebbbbeeeebbebbbeeeebebeebeeebeebeeeeeeeb:    

queryA       327:VRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLP: 426
                :****************************************************************************************************:
6xf5_A_1     316:VRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLP: 415
SecStr          :EE        THHHHHS S    STT EEEEE SEE   HHHHH    SEEEE SS SSTTTT  BSEEEEEEEEEEGGGGGGSSTT  SHHHHHT    :    
ExpBur          :ebbeeeeeebebeebbeeeebbbbebbeeeebeebebebeebeeeeebeeeebeebeeeebeeebbebbebbbbbbebebbebbbeeeeeebbeebbbbe:    

queryA       427:DDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCG: 526
                :****************************************************************************************************:
6xf5_A_1     416:DDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCG: 515
SecStr          :SS  EEEEEEE TTTS  SS BTT EEE   SS   TT        EE SSS  SS  BTTEE SEEE  B TTS GGGSEEEEEEEEEE   S   EE :    
ExpBur          :eebebbbbbbebbeebbeeebbeebebbbebeeebeeebebeeeebeeeeeeebeeeeeeebeebbeebbbeeeeeeeebbbbbbbbbbeeeeeebebbb:    

queryA       527:PKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPVAIHA: 626
                :***********************************************************************************************     :
6xf5_A_1     516:PKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPXXXXX: 615
SecStr          :         SSEEEEEETTEEEEEEEEE      TT  EEE TT  EEEEE SSS  EEEEE   EEEEEEEE  TTT    EEEEET  TTT  -----:    
ExpBur          :eeeeeebeeeebbebbbbbbeeebbbeebeeeeeeeebbbeeeeeeeebbbbbeeeeebbbeebeebbbbbbbbbbeebeeebbbbeebeeeebe-----:    
Contact         :                               b                                                                    

queryA       627:DQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEI: 726
                :             *************************************            **************************************:
6xf5_A_1     616:XXXXXXXXXXXXXSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEI: 715
SecStr          :-------------  EEEETTEEEES EE SS B  SEEEETTEEEEEE ------------  EEEEEEB           TTEEEEEEEEEEEEEEEE:    
ExpBur          :-------------eeeeebebbbbeebeebeeeeeeebebeeebbbbbee------------eeebbbbeeeeeeeeeeeeeeeeeebbeebebebeeeb:    

queryA       727:LPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKV: 826
                :****************************************************************************************************:
6xf5_A_1     716:LPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKV: 815
SecStr          :EE     EEE HHHHHSTT HHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHH   SS     SS  STT   TTTS  TTSSS   HHHHHHHHH :    
ExpBur          :bbbbbebbebebeebbbeebeebeebbeeeeeebeebeeebeebbeebbebbeebbeebeeebeeeeeeebeebebeebbeeeeeebeebebbbbbbeeb:    

queryA       827:TLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQ: 926
                :*                          *************************************************************************:
6xf5_A_1     816:TXXXXXXXXXXXXXXXXXXXXXXXXXXKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQ: 915
SecStr          : --------------------------  SSEEE   SS HHHHHHHHHHHHHHHHHHTTHHHHSS     HHHHHHHHHHTTT  THHHHHSHHHHHHH:    
ExpBur          :e--------------------------eeebbeeeeeebeeeebbeebebbbbbbbebbebbeeeeeeeeebbebbbebbeebebeeebbeeeeeebbee:    

queryA       927:FNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAA:1026
                :***********************************************************  ***************************************:
6xf5_A_1     916:FNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAA:1015
SecStr          :HHHHHHHHHHHHHH TTTTHHHHHHHHHHHHHHHHHHHGGG  TTSS S HHHHHHH  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :beebbeebeeebeeeeeebeebeebeeebeebeeebeeebeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebeebbeebeebbeebb:    

queryA      1027:TKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNC:1126
                :****************************************************************************************************:
6xf5_A_1    1016:TKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNC:1115
SecStr          :HHHHHHTSS   STTSSSSSEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEES EESSSEEEEESSSEEEE SSSEEEE TTS   B  BTTTEEEEEET:    
ExpBur          :ebbeebbbbebeeeebbbeeebbbbbbbbbbebbbbbbbbbeeeeeeebebbebbbeeeebbebeebebbbeeeebbbbbebbbeeeebbeebbeeeeeb:    

queryA      1127:DVVIGIVNNTVYDPLQPELDSFKEEL:1152
                :**************************:
6xf5_A_1    1116:DVVIGIVNNTVYDPLQPELDSFKEEL:1141
SecStr          :TTSSS EE   B TTHHHHHHHHHH :    
ExpBur          :eeeeeeeeeebeeeeeeeeeeeeeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123