#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | C 1 (C) | polymer(polypeptide(L)) [1030 aa] | Spike glycoprotein :SPIKE_SARS2 | |
2 | b | Q 1 (Q) | branched(oligosaccharide) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 481N (identity: 100.0 %/91.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6xey_C_1 identity=91.8% |
queryA 27:AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNV: 126 :********************************************* ***********************************************: 6xey_C_1 27:AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSXXXXXXXXDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNV: 126 SecStr : EEE S B S S EEEEEEEE TTEEE EE -------- EE S EEEEEE SS EEEEES SSSSS EEEEE SS E: ExpBur :eebebbebbbbbeeeeeeeeeeeebebbbbbbeeebeebebbeee--------ebeebebeebbbbbbebeeebbbbbbbbebeeeeeebbbbbbbeeeb: queryA 127:VIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPL: 226 :***************** ******************** ****************************************: 6xey_C_1 127:VIKVCEFQFCNDPFLGVXXXXXXXXXXXXXFRVYSSANNCTFEYVSQPFLXXXXXXXXXXKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPL: 226 SecStr :EEEE B SS ------------- B EEEEE ---------- EEEEEEEE SS EEEEEEEEE SS SS BEEE: ExpBur :ebebbbbebbebbbbbe-------------beebbeeeeeeeeeeeeebe----------eebbbbbbbeeeeebbbbbeeeebeeeeebbeeebbbeee: queryA 227:VDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESI: 326 :****************************************************************************************************: 6xey_C_1 227:VDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESI: 326 SecStr :EEE EEEEE SS SS S EEEEEE EEEEEEEEE TTS EEEEEETTS HHHHHHHHHT SS SEEEEEEEEE EEE: ExpBur :bebebebebeebbbbbbbeebeeeeeeeeeeeeeeebbbbbbebeeeebbbebeeebebeebbbbeeeebbebbbeeeebebeebeeebeebbeeeeeeb: queryA 327:VRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLP: 426 :****************************************************************************************************: 6xey_C_1 327:VRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLP: 426 SecStr :EE S B HHHHS SS STT EEEEE SEE THHHHT TT SEEEEESS GGGGGG EESEEEEEEEEEEGGGGGGSSTT SHHHHHT : ExpBur :ebbeeeeeebebeebbeeeebebbeebeebebeebebebeebeeeeebeeeebeebeeeebbeebbbebebbbbbbebebeebbbeeeeeebbbbbbebb: queryA 427:DDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCG: 526 :****************************************************************************************************: 6xey_C_1 427:DDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCG: 526 SecStr :TT EEEEEEE TTTT TT S EEE SS TT SSS SS BTTB SEEE TTS TTTSEEEEEEEEEE SSS SEE : ExpBur :eebebbbbbbebeeebbeeebbeebbbbbeeeeebeeebebeeeeeeebeeeeeeeeeeebbeebbeebbbeeeeeeeebbbbbbbbbbeeeebebbbbb: Contact : b queryA 527:PKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPVAIHA: 626 :********************************************************************************************** : 6xey_C_1 527:PKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVXXXXXX: 626 SecStr : TTS EEEEETTEEEEEEEEE S TT SEE GGG EEE TTT EEEEE EEEEEEEE TTT S EEEETT SS ------: ExpBur :eeeeeeebbeebbebebbebeeebebeebeeebeeeebbeeeeeeeeebbebbeeeebbbbeebeebbbbbbbbbeeeeeebbbbeeebeeeee------: queryA 627:DQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEI: 726 : ************************************ *************************************: 6xey_C_1 627:XXXXXXXXXXXXXXNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXXQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEI: 726 SecStr :-------------- EEEETTEEEES EE SS B SEEEETTEEEEE ------------- EEEEEB S SSEEEEEEEEEEEEEEEE: ExpBur :--------------eebebeebbbeebeebeeeeeeebebeeebbbbeee-------------eebbbbeeeeeeeeeeeeeeeeeebbeebebebeeeb: queryA 727:LPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKV: 826 :****************************************************************************************************: 6xey_C_1 727:LPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKV: 826 SecStr :EE EEEE HHHHHT S STTHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHT SS SS STT TTTS TT STT HHHHHHHHH : ExpBur :bbbbbebbbbebeebbbeebeebeebbeeeeeebeebeeebeebbeebbebbeebbeebeeebebeeeeebeebebeebbeeeeeeeebbebbebbbeeb: queryA 827:TLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQ: 926 :** ************************************************************************: 6xey_C_1 827:TLXXXXXXXXXXXXXXXXXXXXXXXXXXFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQ: 926 SecStr : -------------------------- SEEEE SS HHHHHHHHHHHHHHHHHTTTHHHHSS HHHHHHHHHHHTT HHHHHTSHHHHHHH: ExpBur :ee--------------------------eebbeeeeeebeeeebbeebbbbbbbbbebbeebeeeeeeebebbebbbebbeebebeeebbeeeeeebbee: queryA 927:FNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAA:1026 :*********************************************************** ***************************************: 6xey_C_1 927:FNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAA:1026 SecStr :HHHHHHHHHHHTTT SGGGHHHHHHHHHHHHHHHHHHHGGG TTSS S HHHHTTSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :beebbeebeeebeeeeeebeebeebbeebeebbeebeeebeeeeebebeebeebeeeeeeebbeebbeebbebbbebbeebbeebeebbeebeebbeebb: queryA 1027:TKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNC:1126 :****************************************************************************************************: 6xey_C_1 1027:TKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNC:1126 SecStr :HHHHHHTSS TTTSSSSEEEEEEEEEETTEEEEEEEEEEEEEEEEEE S EEETTEEEEESSSEEEESSSSEEEE SSS B BTTTEEEEEET: ExpBur :ebbeebbbbebeeeebbbeeebbbbbbbbbeebbbbbbbbbeeeeeeebebbebbbeeeebbeeeeeebbbeeeebbbbbebbebeeebbeebbeeeeee: queryA 1127:DVVIGIVNNTVYDPLQPELD:1146 :********************: 6xey_C_1 1127:DVVIGIVNNTVYDPLQPELD:1146 SecStr :TSSTT EE B TTSTTT : ExpBur :eebeebeeeebeeeeeeeee: |