#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 6x6p_B_1_FA_1

Protein Model on 6x6p_B_1_FA_1 (TEMPLATE: 6x6p )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(queryA) B 1 (B) polymer(polypeptide(L)) [1017 aa] Spike glycoprotein :SPIKE_SARS2
2 b FA 1 (B) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose 603N (identity: 100.0 %/90.5 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6x6p_B_1 identity=90.5%
queryA        27:AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNV: 126
                :******************************************           ***********************************************:
6x6p_B_1      13:AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIXXXXXXXXXXXDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNV: 112
SecStr          : EEEE S   B  SSS   S EEEE  EE  TTEEEEEE   -----------     B SS EEEEE  SSS EEEEEEESSSSSSS EEEEEE SSSE:    
ExpBur          :eeeebebbbbbbeeeeeeeeeeeebeebbbbbebebeebeee-----------eeeebebeebbbbbbebeeebbbbbbbbeebeeebebbbbbeeeeee:    

queryA       127:VIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPL: 226
                :*****************         ********************              *************************    ***********:
6x6p_B_1     113:VIKVCEFQFCNDPFLGVXXXXXXXXXMESEFRVYSSANNCTFEYVSXXXXXXXXXXXXXXKNLREFVFKNIDGYFKIYSKHTPINXXXXLPQGFSALEPL: 212
SecStr          :EEE   EE  SS  B  ---------    B S SEE   S EEE --------------  EEEEEEEEETTEEEEEEEEE   ----       BEEE:    
ExpBur          :bbebbbbebeeebbbbe---------eeeeeebeeeeeeeeeeeee--------------ebbbbbbbbeeebebbbbbeebeee----eeeebebbeee:    

queryA       227:VDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESI: 326
                :*******************                 ****************************************************************:
6x6p_B_1     213:VDLPIGINITRFQTLLALHXXXXXXXXXXXXXXXXXAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESI: 312
SecStr          :EEE       EE  EE   -----------------  EEE   EE  EEEEE TTS EEEEEETTS HHHHHHHHTT SS  SEEEEEEEEE    EEE:    
ExpBur          :eebebebebeebbbbbbee-----------------ebbbbbebeebebbbebeeebebeebbbbbbebbbbbbbeeeeeebeebebebbebebeeeeeb:    

queryA       327:VRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLP: 426
                :****************************************************************************************************:
6x6p_B_1     313:VRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLP: 412
SecStr          :EE      B   HHHHS S    STT EEEEE SEE  HHHHHTT   SEEEESSS TTGGGG EESEEEEEEEEE SGGGGGSSTT  SHHHHHT    :    
ExpBur          :bbbeeeeeebebeebbebeebebbebbeeeebeebbbebeebeeeeebeebebbebeeeebbeebbbbbebbbbbbbbeebebbbeeeeeebbebbbbbb:    

queryA       427:DDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCG: 526
                :**************************************************          ****************************************:
6x6p_B_1     413:DDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGXXXXXXXXXXNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCG: 512
SecStr          :TT  SEEEEEE HHHH  TT     EEE   SS   TT        EE  ---------- EE SEEE    TTS STTS EEEEEEEEE  SS   EE :    
ExpBur          :eebebbbbbbebeeebbeeeeeeebebbbebeeebeeeeebeeeeeeeee----------eeeebbeebebeeeeeeeebbbbbbbbbbbeeeeebebbb:    

queryA       527:PKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPVAIHA: 626
                :****************************************************************************************************:
6x6p_B_1     513:PKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPVAIHA: 612
SecStr          :S        SS EEEEETTEEEEEEEEE      TT  EEE TTS EEEEE SSS  EEEEE   EEEEEEEE  TTT    EEEEET  TTHHHHHHTT:    
ExpBur          :eeeeeebeeeebbebbbbbeeeebebeeeeeebeeeebeeeeeeeebebbbbbeeeebbebeebeebbbbbbbbbbeebeebbbbbeebebeebeebbee:    
Contact         :                                                                            b                       

queryA       627:DQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEI: 726
                :**************************************************            **************************************:
6x6p_B_1     613:DQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEI: 712
SecStr          :T  SS  SS    S  EEETTEEEES EE SS    SEEEETTEEEEEE ------------  EEEEEE   S        TTEEEEES EEEEEEEEE:    
ExpBur          :eebebebeeeeeeeeebebebbbbbebeebeeeeeeebebeeebbbbeee------------eeebbbbeeeeeeeeeeeeeeeeeebbeebebebeeeb:    

queryA       727:LPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKV: 826
                :****************************************************************************************************:
6x6p_B_1     713:LPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKV: 812
SecStr          :EE     EEE HHHHHTTT HHHHHHHHTTGGGTHHHHHHHHHHHHHHHHHHHHHH   SS     SS  STT   TTTS  TTSSS   HHHHHHHHH :    
ExpBur          :bbbbbebbebebeebbbeebeebeebbeeeeeebeebeeebeebbebbbebbeebbeebeeebebeeeeebeebebeebbeeeebebebbebbebbbeeb:    

queryA       827:TLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQ: 926
                :*                           ************************************************************************:
6x6p_B_1     813:TXXXXXXXXXXXXXXXXXXXXXXXXXXXFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQ: 912
SecStr          : ---------------------------  SEEE   SS HHHHHHHHHHHHHHHHHTTTTTTTSS     HHHHHHHHHHTTT  THHHHHHHHHHHHH:    
ExpBur          :e---------------------------eebeeeeeeebeeeebbeebbbbbbbbbebbeebeeeeeeebebbebbbebbeebebeeebbeeeeeebbee:    

queryA       927:FNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAA:1026
                :***********************************************************  ***************************************:
6x6p_B_1     913:FNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAA:1012
SecStr          :HHHHHHHHHHHHHH GGGGHHHHHHHHHHHHHHHHHHHGGG  TTSS S HHHHHTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :beebbeebeeebeeeeeebeebeebeeebeebbeebeeebeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebeebbeebeebbeebb:    

queryA      1027:TKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNC:1126
                :****************************************************************************************************:
6x6p_B_1    1013:TKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNC:1112
SecStr          :HHHHHHTSS   STTTSSSSEEEEEEEEEETTEEEEEEEEEEE  EEEEEE S EESSS EEEESSSEEEESSSSEEEE SSS  EEE BTTTEEE S G:    
ExpBur          :ebbeebbbbbbeeeebbbeeebbbbbbbbbbebbbbbbbbbeeeeeeebeebebbbeeeebbeeeebbbbbeeeebbbbbebbeeeeebbeebbeeeeee:    

queryA      1127:DVVIGIVNNTVYDPLQPELDS:1147
                :*********************:
6x6p_B_1    1113:DVVIGIVNNTVYDPLQPELDS:1133
SecStr          :GGSTT EE   B THHHHTT :    
ExpBur          :eeeeebeeeebeeeeeeeeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123