Protein Model on 6fdt_A_1_B_1 (TEMPLATE: 6fdt )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(SGTA_HUMAN) A 1 (A) polymer(polypeptide(L)) [120 aa] RNA polymerase II-associated protein 3 :RPAP3_HUMAN
2 b B 1 (B) polymer(polypeptide(L)) [9 aa] Heat shock 70 kDa protein 1B :HS71B_HUMAN 95K 99N 102M(F) 103K 126V(L) 130N 133A(M) 137K 160K 163G(A) 164R (identity: 63.6 %/39.4 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6fdt_A_1 identity=39.4%
queryA        95:KTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNE: 193
                :*  **   *    * *   *   *    ***    *** ** *   *  *  **  **  *  ****  * * *   * *  **       * * * * :
6fdt_A_1      10:KDRGNGFFKEGKYERAIECYTRGIAADGANALLPANRAMAYLKIQKYEEAEKDCTQAILLDGSYSKAFARRGTARTFLGKLNEAKQDFETVLLLEPGNK: 108
SecStr          :HHHHHHHHTTT HHHHHHHHHHHHHHTS  SHHHHHHHHHHHHTT HHHHHHHHHHHHHHHS  HHHHHHHHHHHHHTT HHHHHHHHHHHHHHSTT H:    
ExpBur          :eeebeeeeeeeeeeebbebbeebbeeeeeebebbbbbbbbbbeeeebeebbebbeebbeeeeeebebbbebbebbbeeeeeeebeebbebbeeeeeebe:    
Contact         :b   b  bb                      b   b  b   b                      b  bb                              


Input Residue Numbers for Focused Sites

ex) 2,15,123