#WARNING:no index is registered index "YP_009724389.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724389.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7thm_A_1_E_1

Protein Model on 7thm_A_1_E_1 (TEMPLATE: 7thm )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [860 aa] RNA-directed RNA polymerase :R1AB_SARS2
2 b E 1 (G) polymer(polypeptide(L)) [74 aa] Non-structural protein 9 :R1AB_SARS2 4428D 4429I 4430Y 4431N 4432D 4594V 4596V 4598T 4613D 4615I 4623V 4625V 4683D 5120Y 5125R 5127R (identity: 100.0 %/93.2 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7thm_A_1 identity=93.2%
queryA      4398:SFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFR:4497
                :*********************************************   *******   ****************************************  :
7thm_A_1       6:SFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKXXXCRFQEKDXXXNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKXX: 105
SecStr          : HHHHHSSSS   EEE SBTTB    EEEEEEESSS EEEEEEE ---  EEEE --- EEEEE  EEE  HHHHHHHHHHHHHHTTSTTS   EEE --:    
ExpBur          :ebeeebbeebeeebeeeeeeeeeeeeebbbbeeeeebbbbbbbee---bbbbbee---eeebbbbbbbeeeeeebeebeebbeebeebebbbebebbe--:    
Contact         :                              bbbbb                                                                 

queryA      4498:IDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVL:4597
                :     ***********************************************************************************************:
7thm_A_1     106:XXXXXVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVL: 205
SecStr          :-----  EEE  SB SSBHHHHHHHHHS  TTS HHHHHHHHHTTSS GGGGGSSS S SSS THHHHHHGGGHHHHHHHHHHHHHHHHHHHHHT BEE :    
ExpBur          :-----ebbbbbbebbbbbbbbbbbbbbbbeeeebebbeebbeebebbeeebbeeeebebbbebeebbebbeebbeebbebbbebbebbbbbeebbbebbb:    
Contact         :                                                                                                b b 

queryA      4598:TLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDR:4697
                :*******************  ********************************   ********************************************:
7thm_A_1     206:TLDNQDLNGNWYDFGDFIQXXPGSGVPVVDSYYSLLMPILTLTRALTAESHVDXXXTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDR: 305
SecStr          : GGGSBSSS     TT B --     EE HHHHHHHTHHHHHTTTTSGGGB  ---   B    TT    HHHHHHHHHHH TT  S   SSGGG SSHH:    
ExpBur          :bbbbbbbebbbbebbebee--eeebebebbbbbbbbbbbbbbbebbebbbeee---eeeeeebeeeeeebbeebeebbeebbebbeeebbbbbeebeebb:    
Contact         :b              b b       b b                                                         b              

queryA      4698:CILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNV:4797
                :**********************************************************    **************************************:
7thm_A_1     306:CILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSXXXXFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNV: 405
SecStr          :HHHHHHHHHHHHTTSS TTTSB  EE  EETTEE  EE EEE SSS EEE SS  S  ---- HHHHHHHH HHHHHHTSB    SS  S EEEESSSS :    
ExpBur          :bbbbbbbbbbbbbebbeeebbbbbeeebeeeeeeeebbbbbbbebbbbbebeeeeeee----eeeebbeebbbbebeeeeeebebeebebebebbeeeee:    

queryA      4798:AFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFP:4897
                :****************************************************************************************************:
7thm_A_1     406:AFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFP: 505
SecStr          :  B B    B HHHHHHHHHTT S TT S     B   B SBTHHHHHGGGGG       HHHHHHHHHHHHHHGGG       TTT       S   HH:    
ExpBur          :eeeebeeeeeeeebeebbeeeebbeeebebeeebebeeeeeebbbebbbebebbbebbbbbbbbbbbbbbbbbbbeebeebbbeeeebeeeeeeeebbbb:    

queryA      4898:FNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTV:4997
                :**************    **********************************************************************************:
7thm_A_1     506:FNKWGKARLYYDSMXXXXQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTV: 605
SecStr          :HHTT  HHHHHTT ---- HHHHHHHTTS    EEEEEE    BSS    EEEE  HHHHHHHHHHHHHHHHHHHT  SSSB TT  STTTHHHHHHHHH:    
ExpBur          :beeeeebeebbeee----eeebbebbbebbbbbbbebebeeeebeeeebebebbbbbbbbbbbbbbbbebbebbeeeeebbbbbebebeebbbbebbeeb:    

queryA      4998:YSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVN:5097
                :****************************************************************************************************:
7thm_A_1     606:YSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVN: 705
SecStr          :TS  SS   B    TTHHHHS HHHHHHHHHHHTTT TTTS HHHHHHHHHHHHHHHTS EEE SSEEEE  S   TTSTTHHHHHHHHHHHHHHHHHHH:    
ExpBur          :eeebeeeebbbbebeebebbbbbbbbbbbbbbbbbbbeeebeeeebbbbbbbbbbbbbbbbbbbebbbbbbebbbbebbebebbbbbbbbbbbbbbbbbb:    

queryA      5098:ALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDL:5197
                :*********  *****************************************************************************************:
7thm_A_1     706:ALLSTDGNKXXDKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDL: 805
SecStr          :HHHHS TT --  HHHHHHHHHHHHHHT  S  HHHHHHHHHHHHHHEEEEEETTEEEEEE HHHHHHTSS  HHHHHHHHHHHHS    GGG      T:    
ExpBur          :bbbbebbee--eeebeebbbebbebbbeeeeeeeebbeebbebbeebbbbbbeeeebbbbbbeebbeeebbbeeebbbbbbbbbbbbbbeeeebbeeeeb:    
Contact         :                      b    b b                                                                      

queryA      5198:TKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSV:5297
                :*****************   **********************       *************************************              :
7thm_A_1     806:TKGPHEFCSQHTMLVKQXXXYVYLPYPDPSRILGAGCFVDDIXXXXXXXMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLXXXXXXXXXXXXXX: 905
SecStr          :TS  S SSS EEEEE  --- EEEEE  HHHHHHHHHB    ------- THHHHHHHHHHGGGGGSSSHHHHHHHHHHHHHHHH --------------:    
ExpBur          :eebbeebeebbbbebee---ebbbbbbebbebbbbbbbeeee-------eeeebeebbbbbbbbeebeeeebbebbebbbebbeee--------------:    

queryA      5298:MLTNDNTSRYWEPEFYEAMYTPH:5320
                :           ************:
7thm_A_1     906:XXXXXXXXXXXEPEFYEAMYTPH: 928
SecStr          :----------- HHHHHHTTS  :    
ExpBur          :-----------eeeebeebbeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123