[pdbjlvh2]Protein Model on 7rdx_F_1_E

#WARNING:no index is registered index "YP_009724389.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724389.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7rdx_F_1_E_1

Protein Model on 7rdx_F_1_E_1 (TEMPLATE: 7rdx )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(queryA)	F 1 (F)	polymer(polypeptide(L)) [590 aa]	Helicase :R1AB_SARS2
2	b		E 1 (E)	polymer(polypeptide(L)) [590 aa]	Helicase :R1AB_SARS2	5333N 5335Q 5690T 5713A 5714R 5716R (identity: 100.0 %/100.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7rdx_F_1 identity=100.0%

queryA      5325:AVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGS:5424
                :****************************************************************************************************:
7rdx_F_1       5:AVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGS: 104
SecStr          :  EE TTT  EE EEBTTSSS  EE HHHHHHHHHHSS   BBSSSB S  SSS     GGGEEEETTEEEETTT  SS  BSEETTEE  S TTS    :    
ExpBur          :eeeebbbbebebbbebbebeeebbbbbebbeebbeeeebeebbbeeebebebeeeeeeebeebbebeeebebeeeeeeeeeebbeeebbebeeeeebeeb:    
Contact         :        b b                                                                                         

queryA      5425:DNVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTF:5524
                :****************************************************************************************************:
7rdx_F_1     105:DNVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTF: 204
SecStr          :STHHHHHHHHH  S BHHHHHHHHSS HHHHHHHHHHHHHHHHHHHHTS  EEE S   SS B EEE TTS     STT EEEEE  SSS      EEE :    
ExpBur          :eebeebbebbebebeebbbbeebbebeeebbbbbbbbbbbbbbeebeebbbbebeeeeeeebbebebeeeeeebebbeebebbbebeeeeeeeebbbbbb:    

queryA      5525:EKGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYP:5624
                :****************************************************************************************************:
7rdx_F_1     205:EKGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYP: 304
SecStr          : B SSSS B  B S  S   TT EEE          S SS    B SS SS    SS  STTTTSHHHHHHHTTBSEEEEE  SSS HHHHHHHHHHHST:    
ExpBur          :ebbeeeebbeebebbeeebeebbebbbbeeebeebebebbeeeeeeeeeeebeeeeeeeeebeebeeebeebbebbbbbbbbbbebebbebbbbbbebbe:    

queryA      5625:SARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIG:5724
                :****************************************************************************************************:
7rdx_F_1     305:SARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIG: 404
SecStr          :TS EEEEESSHHHHHHHHHHHHHTS STTEEE   SS  S     SS S TT SEEEEEGGG  SEEEEEEEEE GGG  HHHHHHHHHHEEEEEEEEEE:    
ExpBur          :ebbbbbbbbbbebbeebbebbeeebeeeebbbbeeeeebbebeeebeeebeebebbbbbbeebbeeebbbbbbbbbbbbbbbbbbbbbeebebebbbbbb:    
Contact         :                                                                 b                      bb b        

queryA      5725:DPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFL:5824
                :****************************************************************************************************:
7rdx_F_1     405:DPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFL: 504
SecStr          : TTS     TT  BS   GGGS HHHHHHHHS  SEE   BSSS HHHHHHHHHHTSSS   BSS   S EEEEE        SSS   HHHHHHHHHSS:    
ExpBur          :bbbbbbbebebbeeeebebebbbbbbebbeeeeeebebeebebbbeebbebbbeeebeeebeeeeeeeeebbbbebebeeeeeeeebbbeebbbebeeeb:    

queryA      5825:TRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSL:5914
                :******************************************************************************************:
7rdx_F_1     505:TRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSL: 594
SecStr          :SS  S SS EEEES HHHHHHHHHHS   EEEGGG SS  BS EEEE    SSGGG HHHHHHHHTSBSS EEEEES SSTTTSS  B  :    
ExpBur          :eeeeebeebbbbbbbebbbbebbeebebeeebbebbbeeebeebbbbbbeeeeebebebebbbbbbbbeebbbbbbebeebeeebebeee:

Protein Model on 7rdx_F_1_E_1 (TEMPLATE: 7rdx )

Input Residue Numbers for Focused Sites