#WARNING:no index is registered index "YP_009724389.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724389.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7ozu_A_1_D_1

Protein Model on 7ozu_A_1_D_1 (TEMPLATE: 7ozu )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [814 aa] Replicase polyprotein 1ab :R1AB_SARS2
2 b D 1 (P) polymer(polyribonucleotide) Product RNA 4905R 5150L 5151S 5152D 5153D 5205C 5206S 5228R 5232A 5241K 5246L 5250R 5253S 5257D (identity: 100.0 %/97.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7ozu_A_1 identity=97.8%
queryA      4423:VYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQ-------------:4509
                :********************                                                                                :
7ozu_A_1      31:VYRAFDIYNDKVAGFAKFLK-------------------------------------------------------------------XXXXXXXXXXXXX:  63
SecStr          : EEEEEEESSS EEEEEEE --------------------------------------------------------------------------------:    
ExpBur          :eebbebeeeeebbbbbebee--------------------------------------------------------------------------------:    

queryA      4510:------------------------------------------------------RLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWY:4555
                :                                                      **********************************************:
7ozu_A_1      64:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWY: 163
SecStr          :------------------------------------------------------   S BHHHHHHHHHS BTTB HHHHHHHHHTTSS HHHHHSTTSS:    
ExpBur          :------------------------------------------------------eebebbbbbbbbbbbbbeeeebeebeebbeebebbeeebbeeeebb:    

queryA      4556:DFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTK:4655
                :****************************************************************************************************:
7ozu_A_1     164:DFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTK: 263
SecStr          : TTT TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTEE B  GGGBBTTS B    S EE STTT   B HHHHHHHHHHHHHTTGGGGGGBGGG SSS:    
ExpBur          :bbbebeebbebbeebbeebbebbeebbebbeebeeebbebbbbbbbbbbebebeeeeeeeeeeeeebebebbbbbbbbbbbbbbbebbebbebeeeeeee:    

queryA      4656:PYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHS:4755
                :**************************************************************************************************  :
7ozu_A_1     264:PYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLXX: 363
SecStr          : B    TT    HHHHHHHHHHTSTT  S   SSGGG SSHHHHHHHHHHHHHHTSSS TTSSEEEEEEEEETTEEEEEEEEEEETTTEEEE S    --:    
ExpBur          :eeeeeeeeeeebbeebeebbeebbebbeeebbbbbeebeebbbbbbbbbbbbbbbebbeeebbbebeeebeeeeeeeebbbbbbbebbbbbebeeeee--:    

queryA      4756:SRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTM:4855
                :   *************************************************************************************************:
7ozu_A_1     364:XXXSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTM: 463
SecStr          :--- HHHHHHHHH HHHHHHHSB    TT SS EEEESSSS     B      HHHHHHHHHTT S TT S     B   B TTHHHHHHGGGGG     :    
ExpBur          :---eebeebbeebbbbebeeeeeebebeebebebebbeeeeeeeeebeeeeebeebeebbeeeebbeeebebebebebeeeebebbbebbbebebbeebb:    

queryA      4856:CDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSIC:4955
                :****************************************************************************************************:
7ozu_A_1     464:CDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSIC: 563
SecStr          :  HHHHHHHHHHHHHTTSSS      GGG   S SSS   BTGGGT  HHHHHHHS HHHHHHHHHHHTTS    EEEEEE    BSS    EEEE  HH:    
ExpBur          :bbbbbbbbbbbbbbbbbeebebbebebeebeeeebeeebbbbbeeeeebeebbeebeeeebeebbebbbebbbbbbbebebeeebbeeeebebebebbbb:    
Contact         :                                                 b                                                  

queryA      4956:STMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVL:5055
                :****************************************************************************************************:
7ozu_A_1     564:STMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVL: 663
SecStr          :HHHHHHHHHHHHHHHHHT  SSSB TT  STTTHHHHHHHHHTTT SSEEEEEE  TTHHHH  HHHHHHHHHHHTTT TTTS HHHHHHHHHHHHHHTT:    
ExpBur          :bbbbbebbbbebbebbeeeeebbbbbeeeeeebbbbebbeebbeebeeeebbbbebbebebbbbbbbbbbbbbbbbbbbeeebeeeebbbbbbbbbbbbb:    

queryA      5056:SEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAV:5155
                :****************************************************************************************************:
7ozu_A_1     664:SEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAV: 763
SecStr          :T EEEETTEEEE  S   TT TTHHHHHHHHHHHHHHHHHHHHHHHS STT   HHHHHHHHHHHHHHSS  S  HHHHHHHHHHHHHHEEEEEETTEEE:    
ExpBur          :bbbbbbeebbbebebbbbeebebbebbbbbbbbbbbbbbbbbbbbbbebeebeeeebeebbeebbebbbeeeeeeeebbebbbebbeebbbbbbebeebb:    
Contact         :                                                                                              bbbb  

queryA      5156:VCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLA:5255
                :****************************************************************************************************:
7ozu_A_1     764:VCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLA: 863
SecStr          :EEEEHHHHHHTSS  HHHHHHHHHHTT     GGG EEES TTT  S BTTBEEEEEEETTEEEEEEE  HHHHHHHHH  SSGGGGSSHHHHHHHHHHH:    
ExpBur          :bbbbeebbeebbbbbbebbbbbbbbbbbbbbeeeebbeeeebeebbeebeebbbbebebeeeebbbbbbebbebbbbbbbbeeeeeeeeeebbeebbebb:    
Contact         :                                                 bb                     b   b        b    b   b  b  

queryA      5256:IDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHT:5321
                :*********************************             ********************:
7ozu_A_1     864:IDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTXXXXXXXXXXXXXDNTSRYWEPEFYEAMYTPHT: 929
SecStr          :HHTSGGGGSSSHHHHHHHHHHHHHHHHHHHHH -------------  GGGGTSHHHHHGGGSTT :    
ExpBur          :bebbbbeebeeeeebebbebbbebbeebbeeee-------------eeeeeeeeeebbeebbeeee:    
Contact         : b

Input Residue Numbers for Focused Sites

ex) 2,15,123