#WARNING:no index is registered index "YP_009724389.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724389.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7krp_A_1_F_1

Protein Model on 7krp_A_1_F_1 (TEMPLATE: 7krp )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [927 aa] RNA-directed RNA polymerase :R1AB_SARS2
2 b F 1 (T) polymer(polyribonucleotide) RNA (36-MER) 4888N 4892K 4893S 4899N 4935N 4937K 4949V 4950A 4951G 4961R 4969K 4972A 4982G 4984S 4986F 4987Y 5074S 5075G 5076D 5077A 5079T 5081Y 5249E 5252V 5256I 5306R 5307Y 5316M (identity: 100.0 %/100.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7krp_A_1 identity=100.0%
queryA      4395:DAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFF:4494
                :****************************************************************************************************:
7krp_A_1       3:DAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFF: 102
SecStr          : TTHHHHHHHTTS  EEEESSSSS    EEE  EEESSS EEE  EEE S  EEEEE GGG EEEEEEE  B  HHHHHHHHHHHHHSTT SSS B  EE:    
ExpBur          :eeeebbeebbeeeebebeeeeeeeeebebebbbbeeeeebbbbbbbebeebbbbbbeeeeeeeeebbbbbbbeeeebbeebeebbeebeebebbbebbbb:    

queryA      4495:KFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIV:4594
                :****************************************************************************************************:
7krp_A_1     103:KFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIV: 202
SecStr          :EEE SSSEEEEE EEEE SSBHHHHHHHHHS  TTS  TTHHHHHHTTSS SSGGGSTTSS SSS TTHHHHHGGGHHHHHHHHHHHHHHHHHHHTTTEE:    
ExpBur          :ebebeeeeebbbbbbebbebbbbbbbbbbbbbeeeebebbeebbeebebbeeebbeeeebbbbbebeebbebbeebbeebbebbeebbebbebbeebbbe:    

queryA      4595:GVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCL:4694
                :****************************************************************************************************:
7krp_A_1     203:GVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCL: 302
SecStr          :EE  GGGBBTTS B   TT EE STT  EEE HHHHHHHTTHHHHTTTTGGGSBGGG SSS B    TT    HHHHHHHHHHHSSS  S   SSGGG S:    
ExpBur          :bbbbbbbbbbebbbbbbeebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeeeeeeeeebbeebeebbeebbeebeeebbbbbeebe:    

queryA      4695:DDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALT:4794
                :****************************************************************************************************:
7krp_A_1     303:DDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALT: 402
SecStr          :STTHHHHHHHHHHHHTTSS TTS EEEEEEEEETTEEEEEEEEEEETTTEEEE S    SB    HHHHHHHHHSHHHHHHTSEE   TT SS EEEESS:    
ExpBur          :ebbbbbbbbbbbbbbbebbeeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeeebeeeeebeebbbebbbbebeeeeeebebeebebebebbee:    

queryA      4795:NNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSA:4894
                :****************************************************************************************************:
7krp_A_1     403:NNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSA: 502
SecStr          :SS     B   EE HHHHHHHHHTT S TT SS    B   B TTHHHHHHGGGGG       HHHHHHHHHHHHHHT S       GGG   S  SSB :    
ExpBur          :eeeeeeebeeeeebeebeebbeeeebbeeebebeeebebeebeeebbbebbbebebbbebbbbbbbbbbbbbbbbebbeebebbebebeebebeeeeeeb:    
Contact         :                                                                                             b   bb 

queryA      4895:GFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNML:4994
                :****************************************************************************************************:
7krp_A_1     503:GFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNML: 602
SecStr          : TTGGGT BHHHHHHSS HHHHHHHHHHHTTS    EEEEEE  S BSS S  EEEE  HHHHHHHHHHHHHHHHHHTT  SSSB  S  STTTHHHHHH:    
ExpBur          :bbbbeeeeebeebbeebeeeebeebbebbbebbbbbbbebebeeebbeeeebebebbbbbbbbbbbebbbbebbebbeeeeebbbbbebebeebbbbebb:    
Contact         :    b                                   b b           bbb         b       b  b         b b bb       

queryA      4995:KTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTA:5094
                :****************************************************************************************************:
7krp_A_1     603:KTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTA: 702
SecStr          :HHHSSS SSEEEEE   TTTTTS  HHHHHHHHHHHTSS SSSS HHHHHHHHHHHHHHTTS EEE SS EEE  SS  TTSTTSHHHHHHHHHHHHHHH:    
ExpBur          :eebbeebeeeebbbbebbebebbbbbbbbbbbbbbbbbbbeeebeeeebbbbbbbbbbbbbbbbbbbebbbbebebbbbeebebeebbbbbbbbbbbbbb:    
Contact         :                                                                               bbbb b b             

queryA      5095:NVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTE:5194
                :****************************************************************************************************:
7krp_A_1     703:NVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTE: 802
SecStr          :HHHHHHSS SSS   HHHHHHHHHHHHHHTS  S  HHHHHHHHHHHHHHS EEEETTEEEEEEEHHHHHHTSS  HHHHHHHHHHHHS    TTS EEE:    
ExpBur          :bbbbbbbbbbeebeeeebeebbbebbebbbeeeeeeeebbeebbebbeebbbbbbebeebbbbbbbebbeeebbbbbebbbbbbbbbbbbbbeeeebbeb:    

queryA      5195:TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDM:5294
                :****************************************************************************************************:
7krp_A_1     803:TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDM: 902
SecStr          :S GGG  S BTTEEEEEEEETTEEEEEEEE HHHHHHHHHEESSGGGGSSTT STTHHHHHHHTGGGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :eebeebbeebeebebbebebeeeebbbbbbebbebbbbbbbbeeeeebebbeebeebbebbbebbbbeebeeeeebebbebbbebbeebbeebeeeeeee:    
Contact         :                                                      b  b   b                                      

queryA      5295:YSVMLTNDNTSRYWEPEFYEAMYTPHT:5321
                :***************************:
7krp_A_1     903:YSVMLTNDNTSRYWEPEFYEAMYTPHT: 929
SecStr          :SSS  SS   TTTTSHHHHHGGG TT :    
ExpBur          :eeeeeeeeebeebbeeeebeebbeeee:    
Contact         :           bb        b

Input Residue Numbers for Focused Sites

ex) 2,15,123