#WARNING:no index is registered index "YP_009724389.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724389.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7eiz_A_1_H_1

Protein Model on 7eiz_A_1_H_1 (TEMPLATE: 7eiz )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [926 aa] RNA-directed RNA polymerase :R1AB_SARS2
2 b H 1 (J) polymer(polyribonucleotide) template 4888N 4892K 4893S 4899N 4935N 4951G 4961R 4969K 4982G 4984S 4986F 4987Y 5074S 5075G 5076D 5077A 5079T 5081Y 5249E 5307Y 5316M (identity: 100.0 %/100.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7eiz_A_1 identity=100.0%
queryA      4396:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK:4495
                :****************************************************************************************************:
7eiz_A_1       4:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 103
SecStr          : HHHHHHHSTTS      SS SSS   EEEEEEE  SS  EEEEEEE S EEEEEE GGG EEEEEEEEE   HHHHHHHHHHHHH   STTB  EEEEE:    
ExpBur          :eeebeeebbeeeeeebeeeeeeeeebebebbebeeeeebbbbbebeeeebbbbbbbeeeeeeeebbbbbbeeeeeebeebeebbeebeebebbbebebbe:    

queryA      4496:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG:4595
                :****************************************************************************************************:
7eiz_A_1     104:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 203
SecStr          :EESSS EEEEEEEES  SS HHHHHHHHHT  GGG HHHHHHHHHTTSS GGGGGSSS S SSSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT B :    
ExpBur          :eeeeeeebbbbbbbebbebbbbbbbbbbbbbeeeebebbeebbeebebbeeebbeeeebbbbbebeebeebbeebbeebbebbeebbebbebbeeebbeb:    

queryA      4596:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD:4695
                :****************************************************************************************************:
7eiz_A_1     204:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 303
SecStr          :   TTS  SSS B   TT B   TT  B   SSHHHHHTGGGGTTTTTGGGSSTTS SSS      TT     HHHHHHHHHHSTT SS   SSGGG  S:    
ExpBur          :ebbbbbbbbebbbbebbebeeeeeeebebebbbbbbbbbbbbbbbebbebbebeeeeeeeeeeeeeeeeeebeebbeebbeebbeebeeebbbebeebee:    

queryA      4696:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN:4795
                :****************************************************************************************************:
7eiz_A_1     304:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 403
SecStr          :THHHHHHHHHHHHHTSSS SSS S  EEEEEBSS EEEEE EE  SSS  EE SS    BSS  HHHHHHHHT HHHHHHTS B   SS  S   EE SS:    
ExpBur          :bbbbbbbbbbbbbbbebbeeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeeeeeebeeeeebbeebbbbeeeeeeeeeeeeebebebebbeee:    

queryA      4796:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG:4895
                :****************************************************************************************************:
7eiz_A_1     404:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 503
SecStr          :S     B   B  HHHHHHHHHTS S SS S         B SS SHHHHGGGGG       HHHHHHHHHHHHHTT S       GGG   SSTTS   :    
ExpBur          :eeeeeebeeeeebeebeebbeeeebbeeebebeeebebeeeeeebbbebbbebebbbebbbbbbbbbbbbbbbbbbbeebeebbbebeebeeeeeeeebb:    
Contact         :                                                                                            b   bb  

queryA      4896:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK:4995
                :****************************************************************************************************:
7eiz_A_1     504:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 603
SecStr          :TTGGGS SHHHHHHSS HHHHHHHHHHHTTS     EEEEE  S  SS S  EEEEE HHHHHHHHHHHHHHHHHHHT  SSSB SS  SSTTSHHHHHH:    
ExpBur          :bbbeeeeebeebbeebeeeebeebbeebbebbbbbbbebeeeeebbeeeebebebebbbbbbbbbebbbbebbebbeeeeeebbbbeeeeeeebbbebbe:    
Contact         :   b                                   b               b         b       b            b b bb        

queryA      4996:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN:5095
                :****************************************************************************************************:
7eiz_A_1     604:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 703
SecStr          :HH S  SSEEEE    TTHHHH  HHHHHHHHHHHHTT TTT  SHHHHHHHHHHHHHTTS     SSEE    SS  TTSSSHHHHHHHHHHHHHHHHH:    
ExpBur          :ebbeebeeeebbbbebbebebbbbbbbbbbbbbbbbbebeeebeeeebbbbbbbbbbbbbbbbbbbebbbbbbebbbbeebebeebbbbbbbbbbbbbbb:    
Contact         :                                                                              bbbb b b              

queryA      5096:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET:5195
                :****************************************************************************************************:
7eiz_A_1     704:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 803
SecStr          :HHHHHHS STT   HHHHHHHHHHHHHHTT  S  HHHHHHHHHHHHHHEEEEEETTEEEEEEEHHHHHHTSS  HHHHHHHHHHHH S   TTS  EES:    
ExpBur          :bbbbbebebeebeeeebeebbbebbbbbbeeeeebeebbeebbebbeebbbbbbeeeebbbbbbeebbeeebbbebebbbbbbbbbbbbbbeeeebbebe:    

queryA      5196:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY:5295
                :****************************************************************************************************:
7eiz_A_1     804:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 903
SecStr          :  TT  S BTTBEEEEEEETTEEEEEEE  HHHHHHHHS BSSTTSS GGGT HHHHHHHHHS GGGG SSSHHHHHHHHHHHHHHHHHHHHHHHHHHTS:    
ExpBur          :ebeebbeebeebebbeeeeeeeebbbbbbebbebbbbbbbbeeeebeebbeebeebbebbbebbbbeebeeeebbebbebbbebbeebbeeeeeeeeeee:    
Contact         :                                                     b                                              

queryA      5296:SVMLTNDNTSRYWEPEFYEAMYTPHT:5321
                :**************************:
7eiz_A_1     904:SVMLTNDNTSRYWEPEFYEAMYTPHT: 929
SecStr          :        GGGTTSTHHHHTSSSS  :    
ExpBur          :eeeeeeeebeeebeeeebeebbeeee:    
Contact         :           b        b                                                                               


Input Residue Numbers for Focused Sites

ex) 2,15,123