#WARNING:no index is registered index "YP_009724389.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724389.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | C 1 (A) | polymer(polypeptide(L)) [908 aa] | RNA-directed RNA polymerase :R1AB_SARS2 | |
2 | b | G 1 (P) | non-polymer(1RP) | 6-fluoro-3-oxo-4-(5-O-phosphono-beta-D-ribofuranosyl)-3,4-dihydropyrazine-2-carboxamide | 4937K 5015D 5072T 5074S 5079T 5083N 5152D (identity: 100.0 %/98.2 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7dfg_C_1 identity=98.2% |
queryA 4397:QSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKF:4496 :****************************************************************************************************: 7dfg_C_1 6:QSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKF: 105 SecStr : HHHHHHHTTS EEEESSSTTS EEEEEEEE SS EEEEEEEE SEEEEEEE TT EEEEEEEEEE HHHHHHHHHHHHHSTT TTB EEEEEE: ExpBur :eebbeebbeeeebebeeeeeeeeeeebebbbbeeeeebbbbbebeeeebbbbbbeeeeeeeeebbbbbbbeeeebbeebeebbeebeebebbbebbbbee: queryA 4497:RIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGV:4596 :*** ***********************************************************************************************: 7dfg_C_1 106:RIDXXMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGV: 205 SecStr : -- EEEEEEEEE SSBHHHHHHHHHS TTS SHHHHHHHHTTSS GGGTTSTTSS TTT TTHHHHHGGGHHHHHHHHHHHHHHHHHHHHHTEEEE: ExpBur :eee--eebbbbbbebbebbbbbbbbbbbbbeeeebebbeebbeebebbeeebbeeeebbbbbebeebbebbbebbeebbebbeebbebbebbeebbbebe: queryA 4597:LTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDD:4696 :****************************************************************************************************: 7dfg_C_1 206:LTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDD: 305 SecStr : GGGBBSS B TT EE TT EE HHHHHHHHHHHHHTTGGGGGGBGGG TTS B SS HHHHHHHHHHH TT S SSGGG SSH: ExpBur :bbbbbbbbebbbbebbebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeeeeeeeeebbebbeebbeebbebbebebbbbbeebeeb: queryA 4697:RCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNN:4796 :****************************************************************************************************: 7dfg_C_1 306:RCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNN: 405 SecStr :HHHHHHHHHHHHHTTSS GGGSEEEEEEEEETTEEEEEEEEEEETTTEEEE SS SEES HHHHHHHHH HHHHHHTSEE TT SS EEEESSSS: ExpBur :bbbbbbbbbbbbbbebbeeebbbebeeebebeeeeebbbbbbbbebbbbbebeeeeeeeeeeeebbebbbebbbbeeeeeeeebebeebebebebbeeee: queryA 4797:VAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGF:4896 :****************************************************************************************************: 7dfg_C_1 406:VAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGF: 505 SecStr : B EE HHHHHHHHHTT S TT S B B TTHHHHHHGGGGG HHHHHHHHHHHHHTTSS TTS S SSB T: ExpBur :eeeeebeeeeebeebeebbeeeebbeeebebeeebebeeeeeebbbebbbebebbeebbbbbbbbbbbbbbbbebbeebebbebebeebebeeeeeebbb: queryA 4897:PFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKT:4996 :****************************************************************************************************: 7dfg_C_1 506:PFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKT: 605 SecStr :TGGGT BHHHHHHHS HHHHHHHHHHHTTS EEEEEE BSS EEEE HHHHHHHHHHHHHHHHHHTT SSSSB TT STTTHHHHHHHH: ExpBur :bbeeeeebeebbeebeeeebeebbebbbebbbbbbbbbebeeebbeeeebebebebbbbbbbbbebbbbebbeebeeeeebbbbbebebeebbbeebbee: Contact : b queryA 4997:VYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANV:5096 :****************************************************************************************************: 7dfg_C_1 606:VYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANV: 705 SecStr :HTTT SSEEEEE TTHHHH HHHHHHHHHHHHTT TTTS HHHHHHHHHHHHHHTTS EEESSSEEEE SS TT TTHHHHHHHHHHHHHHHHHH: ExpBur :bbeebeeeebbbbebbebebbbbbbbbbbbbbbbbbbbeeebeeeeebbbbbbbbbbbbbbbbbbebbbbbbebbbbeebebbebbbbbbbbbbbbbbbb: Contact : b b b b b queryA 5097:NALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETD:5196 :****************************************************************************************************: 7dfg_C_1 706:NALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETD: 805 SecStr :HHHHTS TTS HHHHHHHHHHHHHHHS S HHHHHHHHHHHHHHEEEEEETTEEEEEEEHHHHHTTSS HHHHHHHHHHTT GGG EEES : ExpBur :bbbbbbebeebeeeebeebbbebbebbbeeeeeeeebbebbeebbeebbbbbbebeebbbbbbeebbeeebbbebebbbbbbbbbbbbbbeeeebbebee: Contact : b queryA 5197:LTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYS:5296 :******************************************************************************************** : 7dfg_C_1 806:LTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTXXXXXXXX: 905 SecStr :TTS S BTTBEEEEEEETTEEEEEEE HHHHHHHHHEESSGGGG SSS SHHHHHHHHHTSGGGGSS HHHHHHHHHHHHHHHHHHHHH --------: ExpBur :beebbeebeebebbebebeeeebbbbbbebbebbbbbbbbeeeeebebeeebeebbebbbebbbbeebeeeebbebbebbbebbeebbeeee--------: queryA 5297:VMLTNDNTSRYWEPEFYEAMYTPHT:5321 : ******************: 7dfg_C_1 906:XXXXXXXTSRYWEPEFYEAMYTPHT: 930 SecStr :------- GGGGSTHHHHGGGSS : ExpBur :-------eeeebeeeebeebbeeee: |