#WARNING:no index is registered index "YP_009724389.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724389.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 5s6x_A_1_B_5

Protein Model on 5s6x_A_1_B_5 (TEMPLATE: 5s6x )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [348 aa] Uridylate-specific endoribonuclease :R1AB_SARS2
2 b B 5 (B) polymer(polypeptide(L)) [348 aa] Uridylate-specific endoribonuclease :R1AB_SARS2 6453S 6454L 6455E 6473E 6475P 6476V 6477S 6478I 6486K 6502P 6503V 6504N 6555S 6556M (identity: 100.0 %/100.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5s6x_A_1 identity=100.0%
queryA      6453:SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIAANTVIWDYKRDAPAHISTIG:6552
                :****************************************************************************************************:
5s6x_A_1       4:SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIAANTVIWDYKRDAPAHISTIG: 103
SecStr          : HHHHHHHHHHHSS         EEEETTEEEEEETTEEEEEEE  SSS HHHHHHHHHTB  S B  HHHHHHTT  EESSSB EETTTTEESSS EES:    
ExpBur          :eeebbbebbeeeebbeeeeeebebeeeeebbbbeeeeeeeebbebebeeebebbbbbbbbbbeebbbbbbbbeebebebbbebbbbbeeeebbbbeebbe:    
Contact         :bbb                 b bbbb       b               bbb                                                

queryA      6553:VCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQASLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNL:6652
                :****************************************************************************************************:
5s6x_A_1     104:VCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQASLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNL: 203
SecStr          :S TTTEEESSTTSTTTTTS EEEETTSTTHHHHHHH SSEEEEESS  TT   EE  S EEETTEEE  SSS    EEEEEETTEEE     B B    S:    
ExpBur          :bbeebeebeebeeeebeeebbbbbeeeeebeeebeebebbbbbbeeebeebeebebbebbbeeeeeeeeeeeebebbbbbbeeeeeeebeeeebbbbbeb:    
Contact         :  bb                                                                                                

queryA      6653:QEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDFSHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLD:6752
                :****************************************************************************************************:
5s6x_A_1     204:QEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDFSHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLD: 303
SecStr          :TT    SHHHHHHHHS HHHHHHHTT TTS HHHHTS B SSSB B   BHHHHHHHHHHS EEEE SS S  SEEEEEEEETTT  EEEEEEEE B HH:    
ExpBur          :eebeeebebbebbeebeeeebbeebebeeebbeebbbbebeeeebbbbbbbbbbbbbeeebebeeeeeeeebebebebebebeeeebebeebbbbbbbbe:    

queryA      6753:DFVEIIKSQDLSVVSKVVKVTIDYTEISFMLWCKDGHVETFYPKLQ:6798
                :**********************************************:
5s6x_A_1     304:DFVEIIKSQDLSVVSKVVKVTIDYTEISFMLWCKDGHVETFYPKLQ: 349
SecStr          :HHHHHHHTS   SSEEEEEEEETTEEEEEEEEEETTEEEEEEE   :    
ExpBur          :ebbebbeeeebeeeeeebebbbbbeebbbbbebeeeebebbebeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123