Protein Model on 5jej_D_1_E_1
(TEMPLATE: 
5jej
)Protein Model on 5jej_D_1_E_1
(TEMPLATE: 5jej
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(IRF5_HUMAN) | D 1 (A) | polymer(polypeptide(L)) [234 aa] | Interferon regulatory factor 3 :IRF3_HUMAN | |
| 2 | b | E 1 (B) | polymer(polypeptide(L)) [233 aa] | Interferon regulatory factor 3 :IRF3_HUMAN | 255Q(F) 258G 304D(M) 305I(S) 306P(L) 307S(T) 354H(E) 356S(L) 357C(L) 360P(S) 382F 383Q(T) 385G 408P 409R(W) 410E(T) 430F(A) 431S(R) 433E(G) 434L(A) (identity: 20.0 %/35.2 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5jej_D_1 identity=35.2% |
queryA 249:DLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQ--VRFPSPEDIPSDKQRF-YTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVF: 345
: * **** *** * * ** * * * * * * * * * * ** * ** * * ** * :
5jej_D_1 18:EFEVTAFYRGRQVFQQTISCPEGLRLVGSEV----------GDRTLPGWPVTLPDPGMSLTDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTY: 107
SecStr : EEEEEEETTEEEEEEEE TT EEEE S ---------- SSS SEEEE SSSHHHHHHHHHHHTT TT EEEEEETTEEEEEE SS EE:
ExpBur :ebbbbbbbeeeeebeeebebeebbbbbbeee----------eeeeeebeebebeebeeeeeeeeebeebeebbeebbbbbbbebeebebebebebebebe:
Contact : b b bbbb
queryA 346:WSGPCASAHDSCPNP-------IQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVVPVAARLLLEMFS-GELSWS: 437
:* * ** * * * ** * * * ** ** ** * * * * *** * * ** * * :
5jej_D_1 108:W----AVSEELLPNSGHGPDGEVPKDKEGGVFDLGPFIVDLITFTEG-SGRSPRYALWFCVGESWPQDQPWTKRLVMVKVVPTCLRALVEMARVGGASSL: 202
SecStr :E----EEE SS S SS SEE SSS EEEEEHHHHHHHHHHHHTT-SS EEEEEESS TTS GGGSS EEEEEEHHHHHHHHHHHHHTT SS:
ExpBur :b----bbbeeeebbeeebeeeebeeeeebebbebbebbeebbeebee-eeebbebbbbbbbeeebbeeeebeebbbbbbbbbbbbebbbebbeebeeeee:
Contact : b bb b bb b bbb bb bb
queryA 438:ADSIRLQISNPDLKDRMVEQFK: 459
: * *** * *:
5jej_D_1 203:ENTVDLHISNSHPLSLTSDQYK: 224
SecStr : EEE BTT EEE HHHHH:
ExpBur :eeebebebbeeeebebbbeebe:
|
[assembly_id:1]
[help]