Protein Model on 6v4p_A_1_B_1 (TEMPLATE: 6v4p )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(ITAL_HUMAN) A 1 (A) polymer(polypeptide(L)) [452 aa] Integrin alpha-IIb :ITA2B_HUMAN
2 b B 1 (B) polymer(polypeptide(L)) [375 aa] Integrin beta-3 :ITB3_HUMAN 400R(F) 401A(D) 403Y 406Y 426R(T) 429H(W) 456I(M) 457G(A) 459Y 462G(H) 483P 484L 487G(M) 491G(A) 515G(L) 516Y 520R 545L(Y) 583R(F) (identity: 36.8 %/37.7 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6v4p_A_1 identity=37.7%
queryA       396:TPEVRAGYLGYTVTW--LPSRQKTSLLASGAPRYQH-MGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRG-: 491
                : **   ** ** *          *     ***      * *                   * *  ****      **  **   **  **** * * *  :
6v4p_A_1     258:NPEYFDGYWGYSVAVGEFDGDLNTTEYVVGAPTWSWTLGAVEILDS-----YYQRLHRLRGEQMASYFGHSVAVTDVNGDGRHDLL-VGAPL-YMESRAD: 350
SecStr          : TTSTT  BTSEEEEE  SS TTS EEEEEETTHHHHTBEEEEE T-----T  EEEEEE SSTTS BTSEEEEE TTSSSS EEE-EEETT- EEE SS:    
ExpBur          :eeebeebebbebbbebebeeeeeeebbbbbbbbbbeebbbbbbbbe-----ebeeeebbebebeebbbbbbbbbbbbbeeeeebbb-bbbbe-beeeeee:    
Contact         :    bb b  b                     b  bb                          bb b  b                    bb  b   bb

queryA       492:------GRVFIYQR----RQLGFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGI: 578
                :      ***           **      * *   *  **** **  * *   **  * ** **       * *  * *   **   ***         * :
6v4p_A_1     351:RKLAEVGRVYLFLQPRGPHALGAPSLL-LTGTQLY--GRFGSAIAPLGDLDRDGYNDIAVAAPYGGPSGRGQVLVFLGQSEGLRSRPSQVLD-SPFPTGS: 446
SecStr          :SSEEE BEEEEE   SSSS   S SEE-EE  STT--  BTSEEEEEESSS SSS EEEEEETT TTTTS EEEEE EETTEE SS SEEEE- SS TTS:    
ExpBur          :eeebbbbbbbbbebeeeeeebeeeeee-bebeeee--bebbbbbbebbebeeeeeebbbbbbbebbeeeebbbbbbbbeeebbeeeeebebe-bebeeeb:    
Contact         :bbb b                            bb   b                        b                                    

queryA       579:QWFGRSIHGVKDLEGDGLADVAVGA--ESQMIVLSSRP: 614
                :  ** *  *  *    *  *  ***    *  *    *:
6v4p_A_1     447:A-FGFSLRGAVDIDDNGYPDLIVGAYGANQVAVYRAQP: 483
SecStr          : -TTSEEEEEE SS SSS EEEEEETTTTEEEEEEE  :    
ExpBur          :b-bbebbebeebbeeeeebbbbbbbbebbebbbbbbee:    
Contact         :    b                    b                                                                          


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