Protein Model on 6uja_A_1_D_1 (TEMPLATE: 6uja )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(ITAL_HUMAN) A 1 (A) polymer(polypeptide(L)) [593 aa] Integrin alpha-V :ITAV_HUMAN
2 b D 1 (C) branched(oligosaccharide) alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 434L(Y) 447Q(S) 448V(L) 449Q(Y) 450T(N) (identity: 0.0 %/32.4 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6uja_A_1 identity=32.4%
queryA       403:YLGYTVTWLP-SRQKTSLLASGAPRY-QHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGE------QRGGRV: 494
                :**** *              ** **     * *        *   *      * *   ***      *   *       ******         *  * *:
6uja_A_1     221:YLGYSVAVGDFNGDGIDDFVSGVPRAARTLGMVYIYD----GKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYADVF-IGAPLFMDRGSDGKLQEVGQV: 315
SecStr          : BTSEEEEE SSSSSS EEEEEETTHHHHT EEEEE ----TTT  EEEEEE SSTTS TTSSEEEE SSSSSS EEE-EEETT EEE TTS EEE  EE:    
ExpBur          :ebbebbbbbebeeeeebbbbbbbbebeeeebbbbbbb----beebeeeeebebebeebebbebbbbbbbbebeebbbb-bbbbebeeeeeeeeeebbbbb:    
Contact         :                                 b            bbbb                                                  

queryA       495:FIYQRRQLGFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQW--------FGR: 583
                :     *  *      * *       *** **  * *   **  * *  **       * *******  **   ***  **       **        ** :
6uja_A_1     316:SVSLQRASGDFQTTKLNGFEVF--ARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNAVPSQILEG-------QWAARSMPPSFGY: 406
SecStr          :EEEEE TTS EEEEEEE SSTT--S TTSEEEEEESTT SSS EEEEEETT SGGG  EEEEE   TTS  SS SEEEE -------    SSS   TTS:    
ExpBur          :bbbbbeeeeeeeeeebebeeee--bebbbbbbebbbbbeeeeebbbbbbbebeeeeebbbbbbbbeeebbeeeeebebeb-------ebeeeeeebbbbe:    

queryA       584:SIHGVKDLEGDGLADVAVGA--ESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQI--KSLIPQFQGRLVANLTYTLQLDG: 679
                :*  *  *    *  *  ***      *    ***          *         **           *   *     *   *        *    * ** :
6uja_A_1     407:SMKGATDIDKNGYPDLIVGAFGVDRAILYRARPVITVNAGLEVYPSILNQDNKTCSLPGTALKVSCFNVRFCLKADGKGVLPR-----KLNFQVELLLDK: 501
SecStr          :SEEEEE SS SSS EEEEEEGGGTEEEEE B  EEEEEEEEEEE SEE TT EEEE SSS  EEEEEEEEEEEEEE SSS  S-----EEEEEEEEEES :    
ExpBur          :bbebeeebbebebbbbbbbbbbbbebbbbbbbbbbeeeeeeeeeeeebbeeeeeeeeeeeeeebbbbeebebebbebeeebee-----ebbbeeeeebbe:    

queryA       680:HRTR---RRGLFPGGR---HELRRNIAVTTSMSCTDFSFHF--PVCVQDLISPINVSLNFSL: 733
                :       ** **   *   *     *     * *              *   **       *:
6uja_A_1     502:LKQKGAIRRALFLYSRSPSHSKNMTISRGGLMQCEELIAYLRDESEFRDKLTPITIFMEYRL: 563
SecStr          : S TTS  SEEETTT SSEEEEEEEEETTS  EEEEEEEEE  TTS S SS EEEEEEEEEE:    
ExpBur          :eeeeeeebbbbbeeeeeeeeeeebebebeeeeeeeeeeebeeeeeeeeeeeeebebbbebbb:    


Input Residue Numbers for Focused Sites

ex) 2,15,123