Protein Model on 5e6s_C_3_A_1 (TEMPLATE: 5e6s )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:4]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(ITAL_HUMAN) C 3 (C) polymer(polypeptide(L)) [578 aa] Integrin alpha-L :ITAL_HUMAN
2 b A 1 (A) polymer(polypeptide(L)) [579 aa] Integrin alpha-L :ITAL_HUMAN 592E 593G 596L 613R 614P 615V (identity: 100.0 %/97.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5e6s_C_3 identity=97.8%
queryA        26:YNLDVRGARSFSPPRAGRHFGYRVLQVGNGVIVGAPGEGNSTGSLYQCQSGTGHCLPVTLRGSNYTSKYLGMTLATDPTDGSILACDPGLSRTCDQNTYL: 125
                :****************************************************************************************************:
5e6s_C_3       1:YNLDVRGARSFSPPRAGRHFGYRVLQVGNGVIVGAPGEGNSTGSLYQCQSGTGHCLPVTLRGSNYTSKYLGMTLATDPTDGSILACDPGLSRTCDQNTYL: 100
SecStr          :  EEEEEEEEE  TT  TTTTSEEEEETTEEEEEE   TT   EEEEEETTT  EEE   TT     TTTTSEEEE TTT  EEEEEEEEEEEETTEEEE:    
ExpBur          :ebbeeeeeeebebeeeeeebbeebbbbeebbbbbbbbeeeeebebbbbebeeeebeebebeeeeeebeebbbbbbbbeeeebbbbbbbbbebebeeeebb:    

queryA       126:SGLCYLFRQNLQGPMLQGRPGFQECIKGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKRKDPDALLKHVK: 225
                :**************************************************************************************** ***********:
5e6s_C_3     101:SGLCYLFRQNLQGPMLQGRPGFQECIKGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKWKDPDALLKHVK: 200
SecStr          :EEEEEEESS TTS EEEE TT      SSEEEEEEEE BTTS HHHHHHHHHHHHHHHHHTTTSS EEEEEEESSSEEEEE HHHHHHH  HHHHTTT  :    
ExpBur          :bbbbbbbeeebebebeebebbbeeeeeeebbbbbbbbbbeebeeeebebbbebbbebbeebeeeebbbbbbbbbeeeeebbbbeebeeeeebeebbeebe:    

queryA       226:HMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKLKDLFT: 325
                :****************************************************************************************************:
5e6s_C_3     201:HMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKLKDLFT: 300
SecStr          :   B   HHHHHHHHHHHTS GGGT  TTSEEEEEEEESS  SS    GGGTTSEEEEEEESGGG SHHHHHTTGGGS S HHHHEEEESSGGGHHHHHH:    
ExpBur          :eeeeebbbbbbbeebbeebbeeeeebeeebbebbbbbbbbeeeeeeebeebeebbbbbbbbbeebeeeebeebbeebbbebbeebbbebeebeebeebee:    

queryA       326:ELQKKIYVIEGTSKQDLTSFNMELSSSGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAGYLGYTVTWLPSRQKTSLLASGAP: 425
                :****            ************************************************************************************:
5e6s_C_3     301:ELQKXXXXXXXXXXXXLTSFNMELSSSGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAGYLGYTVTWLPSRQKTSLLASGAP: 400
SecStr          :HHH ------------  S SSTT  EEEEEEEETTEEEEEETTHHHHTBEEEEE TTSS EEEEE SS  STTTT  BTSEEEEE BSSS  EEEEEET:    
ExpBur          :ebbe------------eeebebbbbbbbebbebbeeebbbbbbbbebebbbbbebeeebebbeebbbeeeeeebeebebbebbbbbebeeeebbbbbbbb:    

queryA       426:RYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFIYQRRQLGFEEVSELQGDPGYPLGRFGEAI: 525
                :****************************************************************************************************:
5e6s_C_3     401:RYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFIYQRRQLGFEEVSELQGDPGYPLGRFGEAI: 500
SecStr          :TGGGT EEEEEE   TT   EEEEEEE  STTS TTSEEEEE TT SSB  EEEEEETT   TTB  EEEEEEE SSSEEEEEE    SSBTT  TTSEE:    
ExpBur          :ebeeebbbbbbebeeeeeebeeeeebebeeeebebbbebbebbbeeebbbbbbbbbbbebeeeebbbbbbbbebeeeebeeeebbebeeebeebebbebb:    

queryA       526:TALTDINGDGLVDVAVGAPLEEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADVAVGAESQMIVLSSRPV: 615
                :******************************************************************************************:
5e6s_C_3     501:TALTDINGDGLVDVAVGAPLEEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADVAVGAESQMIVLSSRPV: 590
SecStr          :EE   SSSSS   EEEEETTSTTBEEEEE EETTEE SS SEEEEHHHH SS   BTSEEE  S SSSSS  EEEEEETTEEEEEEE   :    
ExpBur          :bebeebbeeebbbbbbbbbebeebbbbbbbbeeebbeeeeebebebeebeeebebbbbbbbbeebbeeeeebbbbbbbbbebbbbebeee:    
Contact         :                                                                  bb  b                bbb          


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