Protein Model on 3vi3_A_1_B_1 (TEMPLATE: 3vi3 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(ITAL_HUMAN) A 1 (A) polymer(polypeptide(L)) [601 aa] Integrin alpha-5 :ITA5_HUMAN
2 b B 1 (B) polymer(polypeptide(L)) [427 aa] Integrin beta-1 :ITB1_HUMAN 354I(F) 373W 403Y 406Y 426R(K) 429H(T) 430M(Y) 456I(M) 457G(A) 459Y 462G(Y) 484L 486Y(M) 488E(R) 490R(E) 517P(E) 518L(F) 520R 545L(F) 580W(F) (identity: 30.0 %/32.6 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3vi3_A_1 identity=32.6%
queryA       353:GISADLSR-GHAVVGAVGAKDWAGGFLDLKADLQDDTF--------IGNEPLTPEVRA----GYLGYTVTWLP-SRQKTSLLASGAPRYQ-HMGRVLLFQ: 437
                :* **     *  * *  *   * *  *                         *          **** *     *   *     * *      * *    :
3vi3_A_1     167:GFSAEFTKTGRVVLGGPGSYFWQGQILSATQEQIAESYYPEYLINLVQGQLQTRQASSIYDDSYLGYSVAVGEFSGDDTEDFVAGVPKGNLTYGYVTILN: 266
SecStr          :TSEEEE TT  EEEEETTHHHHTBEEEEE HHHHHHH  TTSS    TT EE     GGG S  BTSSEEEE  SSSSS EEEEEEEEEETTEEEEEEE :    
ExpBur          :bebbbbbeebbbbbbbbbbbeebbbbbbbebebbeebbeeeebeeebeebbebeeeeeeeeebebbbbbbbbbbbeeeeebbbbbbbeeeeeebebbbbb:    
Contact         : b                   b                                       b b  b                    b   bb       

queryA       438:EPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGE------QRGGRVFIYQRRQLGFEEVSELQGDPGYPLGRFGEAITALTDI: 531
                :    *          * *  ****      **  **   **  ****          *  ***  *     * *    *        ****   * * * :
3vi3_A_1     267:----GSDIRSLYNFSGEQMASYFGYAVAATDVNGDGLDDLL-VGAPLLMDRTPDGRPQEVGRVYVYLQHPAGIEPTPTLTLTGHDEFGRFGSSLTPLGDL: 361
SecStr          :----SSS  EEEEEE SSTTS TTSEEEEE  SSSSS EEE-EEETT EEE TT  EEE  EEEEE B SS B SS SEEEE  STT  GGGEEEEEESS:    
ExpBur          :----beebeeeeebebeeeebbbbebbbbbbbbeeeeebbb-bbbbebeeebeeeeebbbbbbbbbbbeeebbeeeeeeebebeeeebebbbbbbebebb:    
Contact         :                  bb b  b                     b b b  b bb b                          bb b           

queryA       532:NGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGI-QWFGRSIHGVKDLEGDGLADVAVGA--ESQMIVLSSRPVVDMVTLMSFS: 625
                :  **  *** ***      ** *  * *  ***   ***        *     **    *  ** * *  *  **        *   ** *         :
3vi3_A_1     362:DQDGYNDVAIGAPFGGETQQGVVFVFPGGPGGLGSKPSQVLQPLWAASHTPDFFGSALRGGRDLDGNGYPDLIVGSFGVDKAVVYRGRPIVSASASLTIF: 461
SecStr          :SSSSS EEEEEETT STTSS EEEEE EETTEE SS SEEE  SS   SS   TTSSEEESS  SSSS   EEEEEGGGTEEEEE B  EEEEEEEEEES:    
ExpBur          :beeeeebbbbbbbebbeeebbbbbbbbbbeebbeeeebbebebebeeeeeebebbebbbbeeebbebebbbbbbbbbbbbebbbbebbbbbebebebebe:    
Contact         :             b                                    b b                       b                       

queryA       626:PAEIPVHEVECSYSTSNKMKEGVNITICFQIKSLIPQFQGRLVAN---LTYTLQLDGHRTR---RRGLFPGGRHE-LRRNIAVTTSM--SCTDFSFHF--: 714
                :**     *  *  *         *   *           *  **     *  ****        ** **   *   *             *         :
3vi3_A_1     462:PAMFNPEERSC--SLEGNPVACINLSFCLNAS-------GKHVADSIGFTVELQLDWQKQKGGVRRALFLASRQATLTQTLLIQNGAREDCREMKIYLRN: 552
SecStr          :S EE TT   E--ESSSSEE EEEEEEEEEEE------- SSS SEEEEEEEEEETTTTTTTS   EEETTTSSSEEEEEEEEETT   EEEEEEEEE  :    
ExpBur          :eeebeeeeeeb--eeeeeebbbbebebbbebe-------beebeeebebebebebbeeeeeeeeebbbbeeeeebeeeeebebebeeeeeeeebebbbee:    

queryA       715:PVCVQDLISPINVSLNFSLWEEEGTPRDQRAQGKDIPPILRPSLHSET: 762
                :     *  ***   *****      * *           *** **   :
3vi3_A_1     553:ESEFRDKLSPIHIALNFSL--DPQAPVDSHG--------LRPALHYQS: 590
SecStr          : S  S  SS EEEEEEEEE-- SSS   SSS--------   EE TTS:    
ExpBur          :eeebeeeeeebbbbbebeb--eeeeeeeeee--------beebebeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123