Protein Model on 3v4v_E_1_JA_1
(TEMPLATE: 
3v4v
)Protein Model on 3v4v_E_1_JA_1
(TEMPLATE: 3v4v
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(ITAL_HUMAN) | E 1 (C) | polymer(polypeptide(L)) [580 aa] | Integrin alpha-4 :ITA4_HUMAN | |
| 2 | b | JA 1 (D) | non-polymer(0DU) | N-(2,6-dichlorobenzoyl)-4-[1,6-dimethyl-2-oxo-4-(trifluoromethyl)-1,2-dihydropyridin-3-yl]-L-phenylalanine | 372D(Y) 401A(F) (identity: 0.0 %/34.7 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3v4v_E_1 identity=34.7% |
queryA 322:DLFTELQKKIYVIEGTSKQD-LTSFNMELSS--SGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAG-YLGYTVTWLPSR-QK: 416
:** *** * * ** * * *** * ** * * * * * **** * * * :
3v4v_E_1 138:DLRTELSKRI----APCYQDYVKKFGENFASCQAGISSFYTKDLIVMGAPGSSYWTGSLFVY--NITTNKYKAFLDKQNQVKFGSYLGYSVGAGHFRSQH: 231
SecStr :T GGG EEE---- TT TT SSTTTTT BTSSEEE SSEEEEEETTHHHHTBEEEEE--ETTTTB BB TT S TT BTSEEEEE SS TT:
ExpBur :ebeeeeeeeb----ebbeeeeeeeebeeebbbebbebbebbeebbbbbbbbbeeebbbbbbb--beeeeeebbbeeeeeebeeebebbebbbbbbbeeee:
Contact : b b
queryA 417:TSLLASGAPRYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFIYQRRQLGF---EEVSELQGD: 513
:* *** * * * ***** * ** ** ** *** **** * * * * :
3v4v_E_1 232:TTEVVGGAPQHEQIGKAYIFSIDEK--ELNILHEMKGKKLGSYFGASVCAVDLNADGFSDLL-VGAPMQSTIREEGRVFVYINSGSGAVMNAMETNLVGS: 328
SecStr :S EEEEEETTGGGT EEEEEEE SS--SEEEEEEEE SSTT TTSEEEEE TT SSS EEE-EEETT SSS EEEEEEE SSSS EE SS B TT:
ExpBur :eebbbbbbbebeebbbbbbbbbeee--bbeeeeebebeeeebbbbbbbbbbbbbeeeebbbb-bbbbbbeeeebbbbbbbbbbeeeebebeeeeeebebe:
queryA 514:PGYPLGRFGEAITALTDINGDGLVDVAVGAPLEE--QGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADVAVGA--ESQMIV: 609
: * **** * * ** ** *** *** * *** ** *** * * ****** * ** ** * * * ****** :
3v4v_E_1 329:DKYA-ARFGESIVNLGDIDNDGFEDVAIGAPQEDDLQGAIYIYNGRADGISSTFSQRIEGLQISKSLSMFGQSISGQIDADNNGYVDVAVGAFRSDSAVL: 427
SecStr : TT- TTSEEE SS SSS EEEEETTHHHHTBEEEEE EETTEE SS SEEEEGGGT TT SEEEEEEEEE SSSSSS EEEEEEGGGTEEEE:
ExpBur :eeeb-bbbbebbbbbbebbeeeeebbbbbbbbbeeebbbbbbbbbeeebbbeeebbebebeeeeeebbbbbbbbbbebebbeeebebbbbbbbebbbbbb:
queryA 610:LSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQIKSLIPQFQGRLVANLTYTLQLDGHRTRR---RGLFP--GGRHELRRNIAVTT-: 703
:* **** * * * * ** * * * * * ** * * * * * * :
3v4v_E_1 428:LRTRPVVIVDASLS-HPESVNRTKFDCVENGWPSV--CIDLTLCFSYKG--KEVPGYIV--LFYNMSLDVNRKAESPPRFYFSSNGTSDVITGSIQVSSR: 520
SecStr :E B EE EEEEEE- SEE TT S BTTB --EEEEEEEEEE --SS SEEE--EEEEEESS S SS SEE SSSTT SEEEEEEEEESS:
ExpBur :bbbeebeebebebe-eeeebeeeeeebeeeeeebb--bbebbbbbebee--eeeeeebe--bebebebbeeeeeeeeebbbbeeeeeeeebeeebebebe:
queryA 704:SMSCTDFSFHFPVCVQDLISPINVSLNFSL: 733
: * * * ** *:
3v4v_E_1 521:EANCRTHQAFMRKDVRDILTPIQIEAAYHL: 550
SecStr :S EEEEEEEEE SS SS EEEEEEEEE:
ExpBur :eeeeeebebbbeeeeeeeeeebebebbbeb:
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[assembly_id:2]
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