Protein Model on 3k6s_E_1_LA_1 (TEMPLATE: 3k6s )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:3] [assembly_id:5]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(ITAL_HUMAN) E 1 (E) polymer(polypeptide(L)) [884 aa] Integrin alpha-X :ITAX_HUMAN
2 b LA 1 (E) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose 820D(T) 850E(V) 897N 904D(T) (identity: 25.0 %/37.5 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3k6s_E_1 identity=37.5%
queryA        26:YNLDVRGARSFSPPRAGRHFGYRVLQVGNG-VIVGAPGE---GNSTGSLYQCQSGTGHCLPVTLR-GSNYTSKYLGMTLATDPTDGSILACDPGLSRTCD: 120
                : ***      *    **  **  * *  *  * ****      * ** ****   ** * *  *          **  **        *** *     * :
3k6s_E_1       1:FNLDTEELTAFRVDSAG--FGDSVVQYANSWVVVGAPQKITAANQTGGLYQCGYSTGACEPIGLQVPPEAVNMSLGLSLASTTSPSQLLACGPTVHHECG:  98
SecStr          :  B SSS EEE    SS-- SSEEEE STTEEEEE TT   TTT    EEEEETTTTEEEE      SSS S  TTSEEEEETTTTEEEEEETT EE  S:    
ExpBur          :bbbbeeeebebeeebeb--bbebbbbbeeeebbbbbbeeeeeeebbbbbbebbeeeeebeeeeeeeeeebeebbbbebbbebeeeeebbbbbbebebebe:    

queryA       121:QNTYLSGLCYLFRQNLQGPMLQGRPGFQECIKGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKRKDPDAL: 220
                : * ** *** *                                                                                         :
3k6s_E_1      99:RNMYLTGLCFLL----------------------------------------------------------------------------------------: 110
SecStr          :S  EE  EEEEE----------------------------------------------------------------------------------------:    
ExpBur          :eeebbbbbbbbb----------------------------------------------------------------------------------------:    

queryA       221:LKHVKHMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKL: 320
                :                                                                                                    :
3k6s_E_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       321:KDLFTELQKKIYVIEGTSKQDLT-----------------------------------------------------------------------------: 343
                :                                                                                                    :
3k6s_E_1     111:-----------------------GPTQLTQRLPVSRQECPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 187
SecStr          :-----------------------SSS  B  S         -----------------------------------------------------------:    
ExpBur          :-----------------------eeeeeeeebeeeeeeeee-----------------------------------------------------------:    

queryA        -1:----------------------------------------------------------------------------------------------------:  -1
                :                                                                                                    :
3k6s_E_1     188:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 287
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       344:---------------------------------------SFNMELSSSGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAGYL: 404
                :                                       **  *    * **       * ****   * **           ***         *  **:
3k6s_E_1     288:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFELEMAQEGFSAVFTPDGPVLGAVGSFTWSGGAFLYPPNM-SPTFINMSQENVDMRDSYL: 386
SecStr          :---------------------------------------  SSSB  TTSSEE  TT  EEEES STTTTBEEEE  SSS-  EEE   SS     S  B:    
ExpBur          :---------------------------------------eeeebebbbbebbbbbeeebbbbbbbbeeebbbbbbbbeee-eeeebebeeeeeebeebeb:    

queryA       405:GYTVTWLPSRQKTSLLASGAPRYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFI--YQRRQL: 502
                :**  * *        *  ******* *    *   *    *       *********  ** **** ** * * *****  *   *** *      *   :
3k6s_E_1     387:GYS-TELALWKGVQSLVLGAPRYQHTGKAVIFT--QVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWR: 483
SecStr          :TSS-EE    SSS EEEEEETTGGGT EEEEEE--  TTT  EEEEE  SSTTS TTS EEEE SSSSSS  EEEEE SS  SS   B EEEEE  SSTT:    
ExpBur          :beb-bebbeeeeeebbbbbbbebeebbbbbbbb--beeeeeeebbebeeeeeebebbbbbbbbbbeeeebbebbbbbbbebeeeeebbbbbbbbbeeeee:    

queryA       503:GFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPLEEQ--GAVYIFNGRHG-GLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADV: 599
                :       * *  * * **** * * * * *** * **  *** **   **** * *  *   **  **** * *  *  * **    *  **  *** * :
3k6s_E_1     484:RWWCDAVLYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEEENRGAVYLFHGVLGPSISPSHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGLVDL: 583
SecStr          :   S SS     S SS  BTS EEEEE SSSSS  EEEEE TTTTTS  BEEEEEB SSS B SS SB  BTTSS TT SSEEEEEEE    S SSS EE:    
ExpBur          :ebebeeebebeeeeeebebbebbbebeebbbeeebbbbbbbbbbeeeebbbbbbbbeeeebbeeeeebebbbeeebeebeebbbbbebeeebbebebbbb:    

queryA       600:AVGAESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQIKSLIPQFQGR--LVANLTYTLQLDGHRTRRRGLFPGGRHE-LR: 696
                :****  *   *  ***      * * *****    **           *   **  *        *   *    *  * **  *   *  *       * :
3k6s_E_1     584:AVGARGQVLLLRTRPVLWVGVSMQFIPAEIPRSAFECREQVVSE-QTLVQSNICLYIDKRSKNLLGSRDLQSSVTLDLALDPGRLSPRATFQETKNRSLS: 682
SecStr          :EEEESS EEEEEB  B  EEEEEEESS S  STTSS  SSS   - EEEEEEEEEEE   TTT SSTTTS EEEEEEEEESTTSSS   EETTT SSEEE:    
ExpBur          :bbbbeebbbbbbbbbbbebbeebebeeeebeeebbeeeeeeeee-eeebebebbbebeeeebbeeeebbeebebbbebbbbeeeeeebbebeeeeeeebe:    

queryA       697:RNIAVTTSMSCTDFSFHFPVCVQDLISPINVSLNFSLWEEEGTPRDQRAQGKDIPPI--LRPSLHSE-----TWEIPFEKNCGEDKKCEANLRVSFSPAR: 789
                :*         *  *    * ** *   **   *** *             **       *** *        *   ******* *  *  **  ***   :
3k6s_E_1     683:RVRVLGLKAHCENFNLLLPSCVEDSVTPITLRLNFTL------------VGKPLLAFRNLRPMLAADAQRYFTASLPFEKNCGADHICQDNLGISFSFPG: 770
SecStr          :EEEEE SS EEEEEEEEE S  S  SS EEEEEEE  ------------     SSSSS   B  SS    EEEEE       SSS       EEEE TT:    
ExpBur          :eeeebbeeeeeeebebbbebeeeebeebbebebebeb------------eeeebeeeebeebbbeeeeeeeeebebbbeebbeeeeeeeeebbbebebee:    

queryA       790:SRALRLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSFRKVEMLKPHSQIP---VSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTLVNS: 886
                :   *       *  *    *  ** *        * *** * *       *       *   *  *       **     **  *        *      :
3k6s_E_1     771:LKSLLVGSNLELNAEVMVWNDGEDSYGTTITFSHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQ-GTWSTSCRINHLIFRGGAQITFLATFDVSPKA: 869
SecStr          :  S EESS  EEEEEEEE   SS BSS EEEEEE TTEEEE     SS  SS     EEEEEE SSS-S EEEEEE TTS B TT  EEEEEEEEE TT :    
ExpBur          :eeebbbeeeeebebebebebeeeebbbbebbbebbebbebeeeeeeeeeeeebeeebebeeeeeeee-eeeebebebeeeebeeeeeeebebbbebeeeb:    
Contact         :                              b                                b                                    

queryA       887:SWGDSVELHANVTCNNEDSDLLEDNSATTI---IPILYPINILIQDQEDSTLYVSFTPKGPK-IHQVKHMYQV-----RIQPSIHDHNIP---TLEAV--: 972
                :  **   * ***   *         * **     *  *         *  * *  *     *  *   * ***     *  *       *     ***  :
3k6s_E_1     870:VLGDRLLLTANVSSENNT----PRTSKTTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQVNNLGQRDLPVSINFWVPVELNQEAVWM: 965
SecStr          :   SEEEEEEEEEBTTB ---- SSS     EEEE EEEE  EEEE S       S  SS      EEEEEEEE  SSS EEEEEEEE    STT  SB :    
ExpBur          :ebeeebebbbebbbbbee----eeeeeeeeeeeeebebbbebbbeeeeeeeebeeeebeeeeeeeebebebebebebeeebebbbbbebbbebeeeebbe:    
Contact         :          b      b                                                                                  

queryA       973:-VGVPQPPSEGPITHQWSVQMEPPVPCHYEDLERLPDAAEPCLPGAL-FRCPV---VFRQEILVQVIGTLEL--VGEIEASSMFSLCSSLSISFNSSKHF:1065
                : * *  *    *     *    **           *        * * *** *       *      * *    *  *      *  *   * *  *   :
3k6s_E_1     966:DVEVSHP--QNPSLRCSSEKIAPPASDFLAHIQKNP-VLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKV-SVVSVAEITFDTSVYS:1061
SecStr          :S EEE T--TS    EEEEEE      HHHHHHH  -EE TTTS EEEEEEEEEEE TT   EEEEEE B SGGGGTTT SSE-EEEEEEEEE  TTTEE:    
ExpBur          :ebeeebe--eeeeeeeeeeeeeeeeeeeeeebeeee-ebebebbbbbebebebeebebeeebbbbbebebbbbbbeebeeeeb-bbbbbbebebeeeeeb:    

queryA      1066:HLYGSNA:1072
                : * *  *:
3k6s_E_1    1062:QLPGQEA:1068
SecStr          :ESSS   :    
ExpBur          :beeeeee:    


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