Protein Model on 2vdp_A_1_C_1 (TEMPLATE: 2vdp )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(ITAL_HUMAN) A 1 (A) polymer(polypeptide(L)) [452 aa] INTEGRIN ALPHA-IIB :ITA2B_HUMAN
2 b C 1 (C) polymer(polypeptide(L)) [8 aa] FIBRINOGEN :Q53Y18_HUMAN 400R(F) (identity: 0.0 %/37.7 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:2vdp_A_1 identity=37.7%
queryA       396:TPEVRAGYLGYTVTW--LPSRQKTSLLASGAPRYQH-MGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRG-: 491
                : **   ** ** *          *     ***      * *                   * *  ****      **  **   **  **** * * *  :
2vdp_A_1     227:NPEYFDGYWGYSVAVGEFDGDLNTTEYVVGAPTWSWTLGAVEILDS-----YYQRLHRLRGEQMASYFGHSVAVTDVNGDGRHDLL-VGAPL-YMESRAD: 319
SecStr          : GGGTT  TTSEEEEE  SS TTS EEEEEETTHHHHT EEEEE T-----T  EEEEEE SSTTS TTSEEEEE  SSSS  EEE-EEETT- EEEETT:    
ExpBur          :eeebeebebbebbbebbbeeeeeeebbbbbbbbbbeebbbbbbbbe-----ebeeeeebebeeeebebbbbbbbbbbbeeeeebbb-bbbbe-beeeeee:    
Contact         :    b                                                                                               

queryA       492:------GRVFIYQR----RQLGFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGI: 578
                :      ***           **      * *   *  **** **  * *   **  * ** **       * *  * *   **   ***         * :
2vdp_A_1     320:RKLAEVGRVYLFLQPRGPHALGAPSLL-LTGTQLY--GRFGSAIAPLGDLDRDGYNDIAVAAPYGGPSGRGQVLVFLGQSEGLRSRPSQVLD-SPFPTGS: 415
SecStr          :TEEEE  EEEEE   STT    S SEE-EE  STT--  TTSEEEEEE SS SSS EEEEEETT STTSSBEEEEE EETTEE SS SEEEE-  S TT :    
ExpBur          :eeebebbbbbbbbbeeeeeebeeeeee-bebeeee--bebbbbbbebbebeeeeeebbbbbbbebbeeeebbbbbbbbbeebbeeeeebebe-bebeeeb:    

queryA       579:QWFGRSIHGVKDLEGDGLADVAVGA--ESQMIVLSSRP: 614
                :  ** *  *  *    *  *  ***    *  *    *:
2vdp_A_1     416:A-FGFSLRGAVDIDDNGYPDLIVGAYGANQVAVYRAQP: 452
SecStr          : -BTSEEEEEE SSSSSS EEEEEEGGGTEEEEEEE  :    
ExpBur          :b-bbebbebeeebeeeeebbbbbbbeebbebbbbbbee:    


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