Protein Model on 1u8c_A_1_B_1
(TEMPLATE: 
1u8c
)Protein Model on 1u8c_A_1_B_1
(TEMPLATE: 1u8c
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(ITAL_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [927 aa] | Integrin alpha-V :ITAV_HUMAN | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [599 aa] | Integrin beta-3 :ITB3_HUMAN | 349L(F) 351S(Q) 354I(F) 373W 403Y 406Y 426R 429H(T) 455Q 456I(M) 457G(A) 459Y 462G(F) 483P 484L 486Y(M) 488E(R) 490R(E) 516Y(F) 520R 545L(Y) 583R(Y) 828S(D) 830R(I) 831K(G) 835L(R) 881N(S) 883L(H) (identity: 32.1 %/29.2 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:1u8c_A_1 identity=29.2% |
queryA 340:QDLTSFNMELSSSGISADLSRGHAVV-GAVGAKDWAGGFL-----DLKADLQDDTF---IGNEPLTPEVRA----GYLGYTVTWLP-SRQKTSLLASGAP: 425
:** * * * * * * * * * * * **** * ** *:
1u8c_A_1 145:QDIDADGQGFCQGGFSIDFTKADRVLLGGPGSFYWQGQLISDQVAEIVSKYDPNVYSIKYNNQLATRTAQAIFDDSYLGYSVAVGDFNGDGIDDFVSGVP: 244
SecStr :S STTTTTT TTSEEEE TTS EEEEETTHHHHTBEEEEE HHHHHHS TT SS SS EE GGGTT BTSEEEEE SSSSS EEEEEET:
ExpBur :eebeeebbbebbbbebbbbbeeebbbbbbbbbbeebbbbbbbebebbeeeeeeeeebbebeeebebeeeeeeeeebebbebbbbbebeeeeebbbbbbbb:
Contact : b b b b bb b b
queryA 426:RY-QHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGE------QRGGRVFIYQRRQLGFEEVSELQGDPGYPL: 518
:* * * * * * * *** * * ****** * * * * * * * :
1u8c_A_1 245:RAARTLGMVYIYD----GKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYADVF-IGAPLFMDRGSDGKLQEVGQVSVSLQRASGDFQTTKLNGFEVF--: 337
SecStr :THHHHT EEEEE ----TTT EEEEEE SSTTS TTSEEEEE TTSSSS EEE-EEETT EEE TT EEE EEEEEEE TTS EEEE B SSTT--:
ExpBur :ebeeebbbbbbbb----beebeeeeebebebeebebbbbbbbbbbbeeeebbbb-bbbbebeeeeeeeeeeebbbbbbbbbeeebeeeeeebebeeee--:
Contact :b b bbb b b bb b b bbb b b b
queryA 519:GRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQW--------FGRSIHGVKDLEGDGLADVAVGA--ES: 605
: *** ** * * ** * * ** * ******* ** *** ** ** ** * * * * * *** :
1u8c_A_1 338:ARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNAVPSQILEG-------QWAARSMPPSFGYSMKGATDIDKNGYPDLIVGAFGVD: 430
SecStr :S GGGEEEE S TT SSS EEEEETT STTT EEEEE EETTEE SS SEEEE ------- SSS TTSB S SSSSS EEEEEETTTT:
ExpBur :bebbbbbbebbbbbeeeeebbbbbbbbbbeeeebbbbbbbbeeebbeeeeebebeb-------eeeeeeeebbbbebbebebebbebebbbbbbbbbbbb:
Contact : b b bbb b b
queryA 606:QMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQI--KSLIPQFQGRLVANLTYTLQLDGHRTR---RRGLFPGGR---HELRR: 697
: * *** * ** * * * * * * ** ** ** * * :
1u8c_A_1 431:RAILYRARPVITVNAGLEVYPSILNQDNKTCSLPGTALKVSCFNVRFCLKADGKGVLPR-----KLNFQVELLLDKLKQKGAIRRALFLYSRSPSHSKNM: 525
SecStr :EEEEEEB EE EE EESSSS SS SB SSS B EEEEE EE SSS S----- EEEEEEE TTT SSS EEETTT SSEEEE :
ExpBur :bbbbbbbbbbbebeeebebeeeebebeeeeeeeeeeeeebbbbbbebbbebebeeebee-----ebbbebebbbbeeeeeeeebbbbbbeeeeeeeeeeb:
queryA 698:NIAVTTSMSCTDFSFHF--PVCVQDLISPINVSLNFSLWEEEGTPRDQR--AQGKDIPPILR---PSLHSETWEIPFEKNCGEDKKCEANLRVSFSPARS: 790
: * * * * ** * * * * *** * * * **** * * ** :
1u8c_A_1 526:TISRGGLMQCEELIAYLRDESEFRDKLTPITIFMEYRL--------DYRTAADTTGLQPILNQFTPANISRQAHILLD--CGEDNVCKPKLEVSVD-SDQ: 614
SecStr : STT B EEEEEE TTT SS EEEEEE EE-------- S TTT EE SS SEEEEEE S-- TTTT EEEEEE- S:
ExpBur :ebbeeeeeeeeebebbbeeeeebeeeeebbbbbbebeb--------eeebbeebeebebebeeeeeeeeeeebbbbee--beeeeebebebebebe-eee:
queryA 791:RALRLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSFRKVEMLKPHSQIPVSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTLVNSSWGD: 890
: * * * ** * * * * ** * * * * *** * * :
1u8c_A_1 615:KKIYIGDDNPLTLIVKAQNQGEGAYEAELIVSIPLQADFIGV-VRNNEALARLSCAFKTENQ---TRQVVCDLGNPM-KAGTQLLAGLRFSVHQQSEMDT: 709
SecStr : EESSS EEEEEEEEEEE SS TTEEEEEE TTEEEEEE- SSSSSB EEE SST---T EEEEEEESS - TT EEEEEEEEE SS S:
ExpBur :eebebbeebebbbebebbbeeebbbebebbbebbebbebebb-beeeeebbebebeeeeeee---eebbbbebeeeb-eeeeeeebbbebbbebeeeeee:
Contact : b bb b b b
queryA 891:SVELHANVTCNN: 902
:** *:
1u8c_A_1 710:SVKFDLQIQSSN: 721
SecStr :EEEEEEEEE :
ExpBur :ebebebebebeb:
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[assembly_id:1]
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