[pdbjlvh2]Protein Model on 1p8j_B_1_MA

Protein Model on 1p8j_B_1_MA_1 (TEMPLATE: 1p8j )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1] [assembly_id:8]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(FURIN_HUMAN)	B 1 (B)	polymer(polypeptide(L)) [468 aa]	Furin precursor :FURI_MOUSE
2	b		MA 1 (B)	non-polymer(SO4)	SULFATE ION	345N 346Q 347N (identity: 100.0 %/97.9 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1p8j_B_1 identity=97.9%

queryA       109:VYQEPTDPKFPQQWYLSGVTQRDLNVKAAWAQGYTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANN: 208
                :*************************** ***** ******************************************************************:
1p8j_B_1       2:VYQEPTDPKFPQQWYLSGVTQRDLNVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANN: 101
SecStr          :       TTGGG TTT  STT S   HHHHHTT S TT EEEEEEB   TT TTTGGGB GGG EETTTTBS       TT TT HHHHHHHHHH  SSS:    
ExpBur          :eeeebebeebeebbbbeeeeeebbbbeebbeeebbbeebbbbbbbbbbbeebebbeebbbeebbebbeeeeeebbbeebeebebeebbbbbbbbbbbbee:    

queryA       209:GVCGVGVAYNARIGGVRMLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGY: 308
                :****************************************************************************************************:
1p8j_B_1     102:GVCGVGVAYNARIGGVRMLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGY: 201
SecStr          :SSS   TTTTSEEEEEE SSS   HHHHHHHHTS TTT  EEEE   S  SSS  B   HHHHHHHHHHHHHHHHHT  EEEEE  S GGGT BGGGBTT:    
ExpBur          :eebbbbbbbebebbbbbbebeeeeeebbbebbebeeeebbbbbbbbebeeebeeeebbeeebeebbeebbeebbeeebbbbbbbbbebbeeebbbbbbbb:    

queryA       309:TNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNA: 408
                :****************************************************************************************************:
1p8j_B_1     202:TNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNA: 301
SecStr          :TSSTTEEEEEEE TTS   TT  B TT  EEEE   STTS  EEEEETTTEEEEEE SHHHHHHHHHHHHHHHHHH TT  HHHHHHHHHHH B TT   :    
ExpBur          :bbbbbbbbbbbbbbebeebebbbebbbbbbbbbbbbeeebeebbbbbbeeeebeebebbbbbbbbbbbbbbbbbbbbeebbbbbbbbbbbebbeeeebee:    
Contact         :                                    bbb                                                             

queryA       409:NDWATNGVGRKVSHSYGYGLLDAGAMVALAQNWTTVAPQRKCIIDILTEPKDIGKRLEVRKTVTACLGEPNHITRLEHAQARLTLSYNRRGDLAIHLVSP: 508
                : ******************************************  ** ************* **************** ****************** **:
1p8j_B_1     302:DDWATNGVGRKVSHSYGYGLLDAGAMVALAQNWTTVAPQRKCIVEILVEPKDIGKRLEVRKAVTACLGEPNHITRLEHVQARLTLSYNRRGDLAIHLISP: 401
SecStr          :S  EE TTS EEBTTTBT B  HHHHHHHHHT       EEEEEEEE S EE TTEEEEEEEE  STTSTT  SEEEEEEEEEEEEES GGGEEEEEE T:    
ExpBur          :eeeeebeeeeebbbbbbbbbbbbbbbbeebeebeebeeeeebebebbeeeeebbeebebeeebebbeeeeeebbebbbbbbebbbebbebbebbbbbbbe:    

queryA       509:MGTRSTLLAARPHDYSADGFNDWAFMTTHSWDEDPSGEWVLEIENTSEANNYGTLTKFTLVLYGTAPE: 576
                :*********************************** ********************************:
1p8j_B_1     402:MGTRSTLLAARPHDYSADGFNDWAFMTTHSWDEDPAGEWVLEIENTSEANNYGTLTKFTLVLYGTAPE: 469
SecStr          :T  EEEEE   TT   S  EEEEEEEE TTTT    EEEEEEEEE SSS   EEEEEEEEEEEEE   :    
ExpBur          :eebebebbeebeebebeebbeebbbbbbbbbbbebeeebbbebebeeeeebebebebbbbbbbbbeee:

Protein Model on 1p8j_B_1_MA_1 (TEMPLATE: 1p8j )

Input Residue Numbers for Focused Sites