Protein Model on 5es4_E_1_T_1 (TEMPLATE: 5es4 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:3]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(ITAL_HUMAN) E 1 (E) polymer(polypeptide(L)) [884 aa] Integrin alpha-X :ITAX_HUMAN
2 b T 1 (T) branched(oligosaccharide) alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 672T 674T(D) 730N 731F 732S(T) (identity: 60.0 %/37.5 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5es4_E_1 identity=37.5%
queryA        26:YNLDVRGARSFSPPRAGRHFGYRVLQVGNG-VIVGAPGE---GNSTGSLYQCQSGTGHCLPVTLR-GSNYTSKYLGMTLATDPTDGSILACDPGLSRTCD: 120
                : ***      *    **  **  * *  *  * ****      * ** ****   ** * *  *          **  **        *** *     * :
5es4_E_1       1:FNLDTEELTAFRVDSAG--FGDSVVQYANSWVVVGAPQKITAANQTGGLYQCGYSTGACEPIGLQVPPEAVNMSLGLSLASTTSPSQLLACGPTVHHECG:  98
SecStr          :  B SSS EEEE  STT--TTSEEEEETTTEEEEEETT  SBTTB BEEEEEETTTTEEEE      TT  S  BTSEEEEEETTEEEEEEEEEEEEEET:    
ExpBur          :bbbbeeeebebeeebeb--bbebbbbbbeeebbbbbbeeeeeeebbbbbbebbeeeeebeebeeeeeeebeebbbbebbbebeeeeebbbbbbbbebebe:    

queryA       121:QNTYLSGLCYLFRQNLQGPMLQGRPGFQECIKGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKRKDPDAL: 220
                : * ** *** *                                                                                         :
5es4_E_1      99:RNMYLTGLCFLL----------------------------------------------------------------------------------------: 110
SecStr          :TEEEEEEEEEEE----------------------------------------------------------------------------------------:    
ExpBur          :eeebebbbbbbb----------------------------------------------------------------------------------------:    

queryA       221:LKHVKHMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKL: 320
                :                                                                                                    :
5es4_E_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       321:KDLFTELQKKIYVIEGTSKQDL------------------------------------------------------------------------------: 342
                :                                                                                                    :
5es4_E_1     111:----------------------GPTQLTQRLPVSRQECPRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 188
SecStr          :---------------------- SSS  EEESSS       -----------------------------------------------------------:    
ExpBur          :----------------------beeeeeeebbeeebeeeee-----------------------------------------------------------:    

queryA        -1:----------------------------------------------------------------------------------------------------:  -1
                :                                                                                                    :
5es4_E_1     189:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 288
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       343:-------------------------------------TSFNMELSSSGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAGYLG: 405
                :                                      **  *    * **       * ****   * **           ***         *  ***:
5es4_E_1     289:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSFELEMAQEGFSAVFTPDGPVLGAVGSFTWSGGAFLYPPNM-SPTFINMSQENVDMRDSYLG: 387
SecStr          :-------------------------------------    SSS  TTSSEE  TT  EEEESSHHHHT EEEE  TTS-  EEE   TT GGGTTS TT:    
ExpBur          :-------------------------------------eeeeeeebebbebbbbbeebbbbbbbbbebebbbbbbbbeee-eeeebebeeeeeebeebbbb:    

queryA       406:YTVTWLPSRQKTSLLASGAPRYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFI--YQRRQLG: 503
                :*  * *        *  ******* *    *   *    *       *********  ** **** ** * * *****  *   *** *      *    :
5es4_E_1     388:YS-TELALWKGVQSLVLGAPRYQHTGKAVIFT--QVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRR: 484
SecStr          :SE-EEEEESSSSEEEEEEETTGGGT EEEEEE--EETTEEEEEEEEE SSTT  TTSEEEEE SS SSS  EEEEE TT EETTEEE EEEEE  STT  :    
ExpBur          :eb-bbbbeeeeebbbbbbbbebeeebbbbbbb--eeeeebeeebebebeeeebebbbbbbbbbbeeeebbbbbbbbbbebeeeeebbbbbbbbbbeeeee:    

queryA       504:FEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPLEEQ--GAVYIFNGRHG-GLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADVA: 600
                :      * *  * * **** * * * * *** * **  *** **   **** * *  *   **  **** * *  *  * **    *  **  *** * *:
5es4_E_1     485:WWCDAVLYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEEENRGAVYLFHGVLGPSISPSHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGLVDLA: 584
SecStr          :    EEE   SSEEEEEETSEEEEEE SSSSS  EEEEEETTHHHHTBEEEEEEEETTTEE SS SEEEEHHHH TT  SBTSEEEEEE SSSSSS EEE:    
ExpBur          :beeeeebeeeeebeebebbebbbebeebbbeebbbbbbbbbbbeeeebbbbbbbbeeeeebeeeeebbbbbeeeeeebeebbbbbbbebebbebebebbb:    

queryA       601:VGAESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQIKSLIPQFQGR--LVANLTYTLQLDGHRTRRRGLFPGGRHE-LRR: 697
                :***  *   *  ***      * * *****    **           *   **  *        *   *    *  * **  *   *  *       * *:
5es4_E_1     585:VGARGQVLLLRTRPVLWVGVSMQFIPAEIPRSAFECREQVVSE-QTLVQSNICLYIDKRSKNLLGSRDLQSSVTLDLALDPGRLSPRATFQETKNRSLSR: 683
SecStr          :EEETTEEEEEEB  EE EEEEEEEESSSB TTTT   SSSS S- EEEEEEEEEEE S  TT  STTTS EEEEEEEEESTT SS S EETTTTBSEEEE:    
ExpBur          :bbbeebbbbbbbbbbbebbeeeebeeeebeeebbeeeeeeeee-ebebebbbbbebeeebeebeeebbeebebebebbbbeeeeeebbebeeeeeeebee:    
Contact         :                                                                         b b                        

queryA       698:NIAVTTSMSCTDFSFHFPVCVQDLISPINVSLNFSLWEEEGTPRDQRAQGKDIPPI--LRPSLHSE-----TWEIPFEKNCGEDKKCEANLRVSFSPARS: 790
                :         *  *    * ** *   **   *** *             **       *** *        *   ******* *  *  **  ***    :
5es4_E_1     684:VRVLGLKAHCENFNLLLPSCVEDSVTPITLRLNFTL------------VGKPLLAFRNLRPMLAADAQRYFTASLPFEKNCGADHICQDNLGISFSFPGL: 771
SecStr          :EEEE SS EEEEEEEEE S  S  SS EEEEEEEE ------------      GGG    EE TTS   EEEEE B   S SS      EEEEEE TT :    
ExpBur          :eeebbeeeeebebebbbebebeeeeebbebebebeb------------ebeebeeeebbebebbeeeeeeeebebbbebeeeeeeeeebebbbebebeee:    
Contact         :                                bbb                                  b                              

queryA       791:RALRLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSFRKVEMLKPHSQIP---VSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTLVNSS: 887
                :  *       *  *    *  ** *        * *** * *       *       *   *  *       **     **  *        *       :
5es4_E_1     772:KSLLVGSNLELNAEVMVWNDGEDSYGTTITFSHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQ-GTWSTSCRINHLIFRGGAQITFLATFDVSPKAV: 870
SecStr          : SEEETTB EEEEEEEEEESSS BSS EEEEEEETTEEEE     SS SSS    EEEEEEE SSS-SEEEEEEEE SS B TT EEEEEEEEEE TT  :    
ExpBur          :eebbbeeeeebebebebebebeebebbbbbbebbeebeeeeeeeeeeeeeebebebebeeeeeeee-eeeebebebeeeebebeeeeebebbbebeeebe:    

queryA       888:WGDSVELHANVTCNNEDSDLLEDNSATTI---IPILYPINILIQDQEDSTLYVSFTPKGPK-IHQVKHMYQV-----RIQPSIHDHNIP---TLEAV---: 972
                : **   * ***   *         * **     *  *         *  * *  *     *  *   * ***     *  *       *     ***   :
5es4_E_1     871:LGDRLLLTANVSSENNT----PRTSKTTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQVNNLGQRDLPVSINFWVPVELNQEAVWMD: 966
SecStr          :  SEEEEEEEEE TT  ---- SSS   EEEEEEEEEEE EEEEE S S       SS  S EEEEEEEEEEEE SS  EEEEEEEEEEEEETTEESEEE:    
ExpBur          :beeebebbbebbbbbee----eeeeeeeeeeeeebebbbbbbbeebeeeeeebebeeeeeeeeeebebebebbbebeeebebbbbbebbbebeeeebbee:    

queryA       973:VGVPQPPSEGPITHQWSVQMEPPVPCHYEDLERLPDAAEPCLPGAL-FRCPV---VFRQEILVQVIGTLEL--VGEIEASSMFSLCSSLSISFNSSKHFH:1066
                :* *  *    *     *    **           *        * * *** *       *      * *    *  *      *  *   * *  *    :
5es4_E_1     967:VEVSHP--QNPSLRCSSEKIAPPASDFLAHIQKNP-VLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKV-SVVSVAEITFDTSVYSQ:1062
SecStr          :EEEE  --SS     EEEEE      HHHHTTSS -EE TTTSEEEEEEEEEEEE TT EEEEEEEEEEESGGGGGG  SS -EEEEEEEEE  TTTEEE:    
ExpBur          :beeebe--eeeeeeeeeeeeeeeeeebeeebeeee-ebeeebbbbbbbebbbeebbbeebbbbbbebebbbbbbeebeeeeb-bbbbbbebebeeeeeeb:    

queryA      1067:LYGSNA:1072
                :* *  *:
5es4_E_1    1063:LPGQEA:1068
SecStr          : SSTTG:    
ExpBur          :eeeeee:    


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