Protein Model on 4irz_A_1_M_1 (TEMPLATE: 4irz )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(ITAL_HUMAN) A 1 (A) polymer(polypeptide(L)) [592 aa] Integrin alpha4 subunit
2 b M 1 (A) non-polymer(NDS) ETHYL DIMETHYL AMMONIO PROPANE SULFONATE 354I 355S 356A(S) 406Y 408V (identity: 80.0 %/34.4 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4irz_A_1 identity=34.4%
queryA       322:DLFTELQKKIYVIEGTSKQD-LTSFNMELSS--SGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAG-YLGYTVTWLPSR-QK: 416
                :** *** * *        **    *     *   ***        * ** *   * *                       *  * **** *     * * :
4irz_A_1     138:DLRTELSKRI----APCYQDYVKKFGENFASCQAGISSFYTKDLIVMGAPGSSYWTGSLFVY--NITTNKYKAFLDKQNQVKFGSYLGYSVGAGHFRSQH: 231
SecStr          :T  GGG EEE---- SS  SS   SSSGGGG  BTSSEEE SS EEEEETTHHHHTBEEEEE--ETTTTEEEEB  SS  S TT  BTSEEEEE SS SS:    
ExpBur          :ebebeeeeeb----ebbbeeeeeeebeebbbbbbbbbbebbeebbbbbbbbbeeebbbbbbb--beeeeeebbbeeeeeebeeebebbebbbbbebeeee:    
Contact         :                                   bbb                                                  b b         

queryA       417:TSLLASGAPRYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFIYQRRQLGF---EEVSELQGD: 513
                :*     ***     *    *                *   *****   * **   **   **  ***        **** *     *         * * :
4irz_A_1     232:TTEVVGGAPQHEQIGKAYIFSIDEK--ELNILHEMKGKKLGSYFGASVCAVDLNADGFSDLL-VGAPMQSTIREEGRVFVYINSGSGAVMNAMETNLVGS: 328
SecStr          :  EEEEEETTGGGT EEEEEEE SS--SEEEEEEEE  STT  TTSEEEEE SSSSSS EEE-EEETT  SSSS  EEEEEEE SSTT EEE SS B TT:    
ExpBur          :ebbbbbbbbebeebbbbbbbbeeee--bbeeebebebeeeebebbbbbbbbbbbeeeebbbb-bbbbebeeeebbbbbbbbbbeeeebebeebeebbebe:    

queryA       514:PGYPLGRFGEAITALTDINGDGLVDVAVGAPLEE--QGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADVAVGA--ESQMIV: 609
                :  *   **** *  * **  **  *** *** *   *** ** ***  * *   ****** *       ** ** *  *    *  ******        :
4irz_A_1     329:DKYA-ARFGESIVNLGDIDNDGFEDVAIGAPQEDDLQGAIYIYNGRADGISSTFSQRIEGLQISKSLSMFGQSISGQIDADNNGYVDVAVGAFRSDSAVL: 427
SecStr          :  TT-  TTSEEE     SSSSS  EEEEETTHHHHTBEEEEE EETTEE SS SEEEEGGGT TT  SEEEEEEEEE SS SSS EEEEEETTTTEEEE:    
ExpBur          :eeeb-bebbbbbebbbebbebeeebbbbbbbbbeeeebbbbbbbbbeebbbeeebbebbbeeeeeebbbbbbbbbbebbbbebebebbbbbbbebbbbbb:    

queryA       610:LSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQIKSLIPQFQGRLVANLTYTLQLDGHRTRR---RGLFP--GGRHELRRNIAVTT-: 703
                :*  ****      *  *         *              * **  *       *  *  * *   **  *      *  *   *        * *   :
4irz_A_1     428:LRTRPVVIVDASLSH-PESVNRTKFDCVENGWPSV--CIDLTLCFSYKG--KEVPGYIV--LFYNMSLDVNRKAESPPRFYFSSNGTSDVITGSIQVSSR: 520
SecStr          :E B  EEEEEEEEE - S B TT     STTS   --EEEEEEEEEEE --TT  SEEE--EEEEEESS S  TTS  SEEESSSTT SEEEEEEEEESS:    
ExpBur          :bbbebbbebebebee-eeebeeeeeebebeeeebb--bbebebbbebee--eeeeeebb--bebebbbbeeeeeebeebbbbeeeeebeeeeeebebeee:    

queryA       704:SMSCTDFSFHFPVCVQDLISPINVSLNFSLWEEEGTPRDQRAQGKDIPPILRPSLHSE: 761
                :   *          * *   **       *    *      *     ** * * *   :
4irz_A_1     521:EANCRTHQAFMRKDVRDILTPIQIEAAYHL----GPHVISKASTEEFPP-LQPILQQK: 573
SecStr          :S   EEEEEEE SS   SSS EEEEEEEEE---- S         SS  -   EE   :    
ExpBur          :eeeeeebebbbeeeeebeeeebebbbebeb----beeeeeeeeeeebee-bebbbbee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123