Protein Model on 3zdy_C_1_D_1 (TEMPLATE: 3zdy )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(ITAL_HUMAN) C 1 (C) polymer(polypeptide(L)) [453 aa] INTEGRIN ALPHA-IIB :ITA2B_HUMAN
2 b D 1 (D) polymer(polypeptide(L)) [469 aa] INTEGRIN BETA-3 :ITB3_HUMAN 400R(F) 401A(D) 403Y 406Y 426R(T) 429H(W) 456I(M) 457G(A) 459Y 462G(H) 483P 484L 487G(M) 516Y 520R 545L(Y) 583R(F) (identity: 41.2 %/38.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3zdy_C_1 identity=38.0%
queryA       396:TPEVRAGYLGYTVTW--LPSRQKTSLLASGAPRYQH-MGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRG-: 491
                : **   ** ** *          *     ***      * *                   * *  ****      **  **   **  **** * * *  :
3zdy_C_1     227:NPEYFDGYWGYSVAVGEFDGDLNTTEYVVGAPTWSWTLGAVEILDS-----YYQRLHRLRGEQMASYFGHSVAVTDVNGDGRHDLL-VGAPL-YMESRAD: 319
SecStr          : GGGTT  BTSEEEEE  SS TTS EEEEEETTHHHHT EEEEE T-----T  EEEEEE SSTTS TTSEEEEE SSSSSS EEE-EEETT- EEEETT:    
ExpBur          :eeebeebebbebbbebbbeeeeeeebbbbbbbbbbeeebbbbbbbe-----ebeeeeebebeeeebbbbbbbbbbbbbeeeeebbb-bbbbe-beeeeee:    
Contact         :    bb b  b                     b  bb                          bb b  b                    bb  b    b

queryA       492:------GRVFIYQR----RQLGFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGI: 578
                :      ***           **      * *   *  **** **  * *   **  * ** **       * *  * *   **   ***         * :
3zdy_C_1     320:RKLAEVGRVYLFLQPRGPHALGAPSLL-LTGTQLY--GRFGSAIAPLGDLDRDGYNDIAVAAPYGGPSGRGQVLVFLGQSEGLRSRPSQVLD-SPFPTGS: 415
SecStr          :TEEEE  EEEEE   STT    S SEE-EE  STT--  TTSEEEEEE SS SSS EEEEEETT STTSS EEEEE EETTEE SS SEEEE-  S TTS:    
ExpBur          :eeebbbbbbbbbebeeeeeebeeeeee-bebeeee--bebbbbbbebbbbbeeeeebbbbbbbebbeebebbbbbbbbeeebbeeeeebebe-bebeeeb:    
Contact         :b b b                             b   b                        b                                    

queryA       579:QWFGRSIHGVKDLEGDGLADVAVGA--ESQMIVLSSRPV: 615
                :  ** *  *  *    *  *  ***    *  *    **:
3zdy_C_1     416:A-FGFSLRGAVDIDDNGYPDLIVGAYGANQVAVYRAQPV: 453
SecStr          : -TTSEEEEEE SS SSS EEEEEEGGGTEEEEE B   :    
ExpBur          :b-bbebbebeeebeeeebbbbbbbbbebbebbbbbbeee:    
Contact         :    b                    b                                                                          


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