Protein Model on 3k71_E_1_Q_1 (TEMPLATE: 3k71 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:3] [assembly_id:5]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(ITAL_HUMAN) E 1 (E) polymer(polypeptide(L)) [882 aa] Integrin alpha-X :ITAX_HUMAN
2 b Q 1 (Q) branched(oligosaccharide) alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 371K(F) 389F 391G(N) 393E(S) 394P(Q) (identity: 20.0 %/37.4 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3k71_E_1 identity=37.4%
queryA        26:YNLDVRGARSFSPPRAGRHFGYRVLQVGNG-VIVGAPGE---GNSTGSLYQCQSGTGHCLPVTLR-GSNYTSKYLGMTLATDPTDGSILACDPGLSRTCD: 120
                : ***      *    **  **  * *  *  * ****      * ** ****   ** * *  *          **  **        *** *     * :
3k71_E_1       1:FNLDTEELTAFRVDSAG--FGDSVVQYANSWVVVGAPQKITAANQTGGLYQCGYSTGACEPIGLQVPPEAVNMSLGLSLASTTSPSQLLACGPTVHHECG:  98
SecStr          :  B SSS EEE    SS-- SSEEEE STTEEEEE TT   TTT    EEEEETTTTEEEE      TTS S  TTSEEEEETTTTEEEEEETT EE  S:    
ExpBur          :bbbbeeeebebeeebeb--bbebbbbbbeeebbbbbbeeeeeeebbbbbbebbeeeeebeeeeeeeeeebeebbbbebbbebeeeeebbbbbbbbebebe:    

queryA       121:QNTYLSGLCYLFRQNLQGPMLQGRPGFQECIKGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKRKDPDAL: 220
                : * ** *** *                                                                                         :
3k71_E_1      99:RNMYLTGLCFLL----------------------------------------------------------------------------------------: 110
SecStr          :S  EE  EEEEE----------------------------------------------------------------------------------------:    
ExpBur          :eeebbbbbbbbb----------------------------------------------------------------------------------------:    

queryA       221:LKHVKHMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKL: 320
                :                                                                                                    :
3k71_E_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       321:KDLFTELQKKIYVIEGTSKQDLTS----------------------------------------------------------------------------: 344
                :                                                                                                    :
3k71_E_1     111:------------------------GPTQLTQRLPVSRQECPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 186
SecStr          :------------------------SSS  B  S S      -----------------------------------------------------------:    
ExpBur          :------------------------eeeeeeeebeeeeeeee-----------------------------------------------------------:    

queryA        -1:----------------------------------------------------------------------------------------------------:  -1
                :                                                                                                    :
3k71_E_1     187:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 286
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       345:-----------------------------------------FNMELSSSGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAGY: 403
                :                                         *  *    * **       * ****   * **           ***         *  *:
3k71_E_1     287:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFELEMAQEGFSAVFTPDGPVLGAVGSFTWSGGAFLYPPNM-SPTFINMSQENVDMRDSY: 385
SecStr          :-----------------------------------------  SSB  TTSSB   TT  EEEES STTTTBEEEE  SSS-  EEE   SS     S  :    
ExpBur          :-----------------------------------------eeebebbbbebbbbbeeebbbbbbbbeeebbbbbbbbeee-eeeebebeeeeeebeebe:    
Contact         :                                                                   b                 b b bb         

queryA       404:LGYTVTWLPSRQKTSLLASGAPRYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFI--YQRRQ: 501
                :***  * *        *  ******* *    *   *    *       *********  ** **** ** * * *****  *   *** *      *  :
3k71_E_1     386:LGYS-TELALWKGVQSLVLGAPRYQHTGKAVIFT--QVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGW: 482
SecStr          :BTSS-EE    SSS EEEEEETTGGGT EEEEEE--  TTT  EEEEE  SSTTS TTS EEEE SSSSSS  EEEEE SS  SS   B EEEEE  SST:    
ExpBur          :bbeb-bebbeeeeeebbbbbbbebeebbbbbbbb--beeeeeeebbebeeeeeebebbbbbbbbbbeeeebbebbbbbbbebeeeeebbbbbbbbbeeee:    

queryA       502:LGFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPLEEQ--GAVYIFNGRHG-GLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLAD: 598
                :        * *  * * **** * * * * *** * **  *** **   **** * *  *   **  **** * *  *  * **    *  **  *** *:
3k71_E_1     483:RRWWCDAVLYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEEENRGAVYLFHGVLGPSISPSHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGLVD: 582
SecStr          :T   S SS     S SS  BTSEEEEEE SSSSS  EEEEE TTTTTS  BEEEEEB SSS B SS SB  BTTSS  S SSEEEEEEEEE  S SSS E:    
ExpBur          :eebebebebebeeeeeebebbebbbebeebbbeeebbbbbbbbbbeeeebbbbbbbbeeeeebeeeeebebbbeeeeeebeebbbbbebebebbebebbb:    

queryA       599:VAVGAESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQIKSLIPQFQGR--LVANLTYTLQLDGHRTRRRGLFPGGRHE-L: 695
                : ****  *   *  ***      * * *****    **           *   **  *        *   *    *  * **  *   *  *       *:
3k71_E_1     583:LAVGARGQVLLLRTRPVLWVGVSMQFIPAEIPRSAFECREQVVSE-QTLVQSNICLYIDKRSKNLLGSRDLQSSVTLDLALDPGRLSPRATFQETKNRSL: 681
SecStr          :EEEEESS EEEEEB  B  EEEEEEESS S  STTSS  SSS   - EEEEEEEEEEE   TTT SSTTTS EEEEEEEEESTTSSS   EETTT SSEE:    
ExpBur          :bbbbbeebbbbbbbbbbbebeeeeebeeeebeeebbeeeeeeeee-eeebebebbbebeeeebbeeeebbeebebbbebbbbeeeeeebbebeeeeeeeb:    

queryA       696:RRNIAVTTSMSCTDFSFHFPVCVQDLISPINVSLNFSLWEEEGTPRDQRAQGKDIPPI--LRPSLHSE-----TWEIPFEKNCGEDKKCEANLRVSFSPA: 788
                : *         *  *    * ** *   **   *** *             **       *** *        *   ******* *  *  **  ***  :
3k71_E_1     682:SRVRVLGLKAHCENFNLLLPSCVEDSVTPITLRLNFTL------------VGKPLLAFRNLRPMLAADAQRYFTASLPFEKNCGADHICQDNLGISFSFP: 769
SecStr          :EEEEEE SS  EEEEEEEE S  S  SS EEEEEEE  ------------     SSSSS   B  SS   EEEEEE       SSS       EEEE S:    
ExpBur          :eeeeebbeeeeeeebebbbebeeeebeebbebebebeb------------eeeebeeeebeebbbeeeeeeeeebebbbeebbeeeeeeeeebbbebebe:    

queryA       789:RSRALRLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSFRKVEMLKPHSQIP---VSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTLVN: 885
                :    *       *  *    *  ** *        * *** * *       *       *   *  *       **     **  *        *     :
3k71_E_1     770:GLKSLLVGSNLELNAEVMVWNDGEDSYGTTITFSHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQ-GTWSTSCRINHLIFRGGAQITFLATFDVSPK: 868
SecStr          :S  S EESS  EEEEEEEE   SS BSS EEEEEEETTEEEE     SS  S      EEEEEE SSS-SEEEEEEE TTS B TT  EEEEEEEEE TT:    
ExpBur          :eeeebbbeeeeebebebebebebeebebbebbbebbebbebeeeeeeeeeeeebebebeeeeeeeeee-eeeebebebeeeebeeeeeeebebbbebeee:    

queryA       886:SSWGDSVELHANVTCNNEDSDLLEDNSATTI---IPILYPINILIQDQEDSTLYVSFTPKGPK-IHQVKHMYQV-----RIQPSIHDHNIP---TLEAV-: 972
                :   **   * ***   *         * **     *  *         *  * *  *     *  *   * ***     *  *       *     *** :
3k71_E_1     869:AVLGDRLLLTANVSSENNT----PRTSKTTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQVNNLGQRDLPVSINFWVPVELNQEAVW: 964
SecStr          :    SEEEEEEEEEBTTB ---- SSS     EEEE EEEE EEEEE S       S  SS      EEEEEEEEE SSS   EEEEEE    STT  SB:    
ExpBur          :bebeeebebbbebbbbbee----eeeeeeeeeeeeebebbbebbbeeeeeeeebeeeebeeeeeeeebebebebebebeeebebbbbbbbbbebeeeebb:    

queryA       973:--VGVPQPPSEGPITHQWSVQMEPPVPCHYEDLERLPDAAEPCLPGAL-FRCPV---VFRQEILVQVIGTLEL--VGEIEASSMFSLCSSLSISFNSSKH:1064
                :  * *  *    *     *    **           *        * * *** *       *      * *    *  *      *  *   * *  *  :
3k71_E_1     965:MDVEVSHP--QNPSLRCSSEKIAPPASDFLAHIQKNP-VLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKV-SVVSVAEITFDTSVY:1060
SecStr          : S EEE T--TS    EEEEEE      HHHHHHH  -EE TTTS EEEEEEEES   TT   EEEEEE B SGGGTTTT SS -EEEEEEEEE  TTTE:    
ExpBur          :eebeeebe--eeeeeeeeeeeeeeeeeeeeeebeeee-ebebebbebbebebebeebebeeebbbbbebebbbbbbeebeeeeb-bbbbbbebebeeeee:    

queryA      1065:FHLYGSNA:1072
                :  * *  *:
3k71_E_1    1061:SQLPGQEA:1068
SecStr          :EESSS  G:    
ExpBur          :bbeeeeee:    


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