[pdbjlvh2]Protein Model on 3k6s_C_1_M

Protein Model on 3k6s_C_1_M_1 (TEMPLATE: 3k6s )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2] [assembly_id:5]
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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(ITAL_HUMAN)	C 1 (C)	polymer(polypeptide(L)) [885 aa]	Integrin alpha-X :ITAX_HUMAN
2	b		M 1 (M)	branched(oligosaccharide)	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	371K(F) 391G(N) 394P(Q) (identity: 0.0 %/37.5 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3k6s_C_1 identity=37.5%
queryA        26:YNLDVRGARSFSPPRAGRHFGYRVLQVGNG-VIVGAPGE---GNSTGSLYQCQSGTGHCLPVTLR-GSNYTSKYLGMTLATDPTDGSILACDPGLSRTCD: 120
                : ***      *    **  **  * *  *  * ****      * ** ****   ** * *  *          **  **        *** *     * :
3k6s_C_1       1:FNLDTEELTAFRVDSAG--FGDSVVQYANSWVVVGAPQKITAANQTGGLYQCGYSTGACEPIGLQVPPEAVNMSLGLSLASTTSPSQLLACGPTVHHECG:  98
SecStr          :  B SSS EEE    SS-- SSEEEE STTEEEEE TT   TTT    EEEEETTTTEEEE      SS  S  TTSEEEEETTTTEEEEEETT EE  S:    
ExpBur          :ebbbeeeebebeeebeb--bbebbbbbeeeebbbbbbeeeeeeebbbbbbebbeeeeebeeeeeeeeeebeebbbbebbbebeeeeebbbbbbebebebe:    

queryA       121:QNTYLSGLCYLFRQNLQGPMLQGRPGFQECIKGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKRKDPDAL: 220
                : * ** *** *                                                                                         :
3k6s_C_1      99:RNMYLTGLCFLL----------------------------------------------------------------------------------------: 110
SecStr          :S  EE  EEEEE----------------------------------------------------------------------------------------:    
ExpBur          :eeebbbbbbbbb----------------------------------------------------------------------------------------:    

queryA       221:LKHVKHMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKL: 320
                :                                                                                                    :
3k6s_C_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       321:KDLFTELQKKIYVIEGTSKQDL------------------------------------------------------------------------------: 342
                :                                                                                                    :
3k6s_C_1     111:----------------------GPTQLTQRLPVSRQECPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 188
SecStr          :----------------------SSS  B  S         ------------------------------------------------------------:    
ExpBur          :----------------------eeeeeeeebeeeeeeeee------------------------------------------------------------:    

queryA        -1:----------------------------------------------------------------------------------------------------:  -1
                :                                                                                                    :
3k6s_C_1     189:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 288
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       343:-------------------------------------TSFNMELSSSGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAGYLG: 405
                :                                      **  *    * **       * ****   * **           ***         *  ***:
3k6s_C_1     289:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSFELEMAQEGFSAVFTPDGPVLGAVGSFTWSGGAFLYPPNM-SPTFINMSQENVDMRDSYLG: 387
SecStr          :-------------------------------------   SSSB  TTSSEE  TT  EEEES STTTTBEEEE  SSS-  EEE   SS     S  BT:    
ExpBur          :-------------------------------------eeeeebebbbbebbbbbeeebbbbbbbbeeebbbbbbbbeee-eeeebebeeeeeebeebebb:    
Contact         :                                                                 b                   b  b           

queryA       406:YTVTWLPSRQKTSLLASGAPRYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFI--YQRRQLG: 503
                :*  * *        *  ******* *    *   *    *       *********  ** **** ** * * *****  *   *** *      *    :
3k6s_C_1     388:YS-TELALWKGVQSLVLGAPRYQHTGKAVIFT--QVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRR: 484
SecStr          :SS-EE    SSS EEEEEETTGGGT EEEEEE--  TTT  EEEEE  SSTTS TTS EEEE SSSSSS  EEEEE SS  SS   B EEEEE  SSTT :    
ExpBur          :eb-bebbeeeeeebbbbbbbebeebbbbbbbb--beeeeeeebbebebeeeebebbbbbbbbbbeeeebbebbbbbbbebeeeeebbbbbbbbbbebeeb:    

queryA       504:FEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPLEEQ--GAVYIFNGRHG-GLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADVA: 600
                :      * *  * * **** * * * * *** * **  *** **   **** * *  *   **  **** * *  *  * **    *  **  *** * *:
3k6s_C_1     485:WWCDAVLYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEEENRGAVYLFHGVLGPSISPSHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGLVDLA: 584
SecStr          :  S SS     S SS  BTS EEEEE SSSSS  EEEEE TTTTTS  BEEEEEB SSS B SS SB  BTTSS TT SSEEEEEEE    S SSS EEE:    
ExpBur          :bebeeebebeeeeeebebbebbbebbebbbeeebbbbbbbbbbeeeebbbbbbbbeebeebeeeeebebbbeeebeebeebbbbbebeeebbeeebbbbb:    

queryA       601:VGAESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQIKSLIPQFQGR--LVANLTYTLQLDGHRTRRRGLFPGGRHE-LRR: 697
                :***  *   *  ***      * * *****    **           *   **  *        *   *    *  * **  *   *  *       * *:
3k6s_C_1     585:VGARGQVLLLRTRPVLWVGVSMQFIPAEIPRSAFECREQVVSE-QTLVQSNICLYIDKRSKNLLGSRDLQSSVTLDLALDPGRLSPRATFQETKNRSLSR: 683
SecStr          :EEESS EEEEEB  B  EEEEEEESS S  STTTB TT SS  - EEEEEEEEEEE   TTT SSTTTS EEEEEEEEESTTSSS   EETTT SSEEEE:    
ExpBur          :bbbeebbbbbbbbbbbebeeebebeeeebeeebbebeeeeeee-eeebebebbbebeeeebbeeeebbeebebbbebbbbeeeeeebbebeeeeeeebee:    

queryA       698:NIAVTTSMSCTDFSFHFPVCVQDLISPINVSLNFSLWEEEGTPRDQRAQGKDIPPI--LRPSLHSE-----TWEIPFEKNCGEDKKCEANLRVSFSPARS: 790
                :         *  *    * ** *   **   *** *             **       *** *        *   ******* *  *  **  ***    :
3k6s_C_1     684:VRVLGLKAHCENFNLLLPSCVEDSVTPITLRLNFTL------------VGKPLLAFRNLRPMLAADAQRYFTASLPFEKNCGADHICQDNLGISFSFPGL: 771
SecStr          :EEEE SS EEEEEEEEE SB S  SS EEEEEEE  ------------     SSSSS   B  SS    EEEEE       SSS       EEEE TT :    
ExpBur          :eeebbeeeeeeebebbbebeeeebeebbebebebeb------------eeeebeeeebeebebbeeeeeeeebebbbeeebeeeeeeeeebbbebebeee:    

queryA       791:RALRLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSFRKVEMLKPHSQIP---VSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTLVNSS: 887
                :  *       *  *    *  ** *        * *** * *       *       *   *  *       **     **  *        *       :
3k6s_C_1     772:KSLLVGSNLELNAEVMVWNDGEDSYGTTITFSHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQ-GTWSTSCRINHLIFRGGAQITFLATFDVSPKAV: 870
SecStr          : S EESS  EEEEEEEE   SS BSS EEEEEE TTEEEE     TT  SS     EEEEEE SSS-S EEEEEE TTS B TT  EEEEEEEEE TT  :    
ExpBur          :eebbbeeeeebebebebebeebebebbebbbebbebbebeeeeeeeeeeeebeeebebeeeeeeee-eeeebebebeeeebeeeeeeebbbbbebeeebe:    

queryA       888:WGDSVELHANVTCNNEDSDLLEDNSATTI---IPILYPINILIQDQEDSTLYVSFTPKGPK-IHQVKHMYQV-----RIQPSIHDHNIP---TLEAV---: 972
                : **   * ***   *         * **     *  *         *  * *  *     *  *   * ***     *  *       *     ***   :
3k6s_C_1     871:LGDRLLLTANVSSENNT----PRTSKTTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQVNNLGQRDLPVSINFWVPVELNQEAVWMD: 966
SecStr          :  SEEEEEEEEEBTTB ---- SSS     EEEE EEEE  EEEE S       S  SS      EEEEEEEE  SSS EEEEEEEE    STT  SB S:    
ExpBur          :beeebebbbebebbbee----eeeeeeeeeeeeebebbbebbbeeeeeeeebeeeebeeeeeeeebebebbbebebeeebebbbbbebbbebeeeebbee:    

queryA       973:VGVPQPPSEGPITHQWSVQMEPPVPCHYEDLERLPDAAEPCLPGAL-FRCPV---VFRQEILVQVIGTLEL--VGEIEASSMFSLCSSLSISFNSSKHFH:1066
                :* *  *    *     *    **           *        * * *** *       *      * *    *  *      *  *   * *  *    :
3k6s_C_1     967:VEVSHP--QNPSLRCSSEKIAPPASDFLAHIQKNP-VLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKV-SVVSVAEITFDTSVYSQ:1062
SecStr          : EEE T--TS    EEEEEE      HHHHHHH  -EE TTTS EEEEEEEEEEE TT   EEEEEE B SGGGGTTT SSE-EEEEEEEEE  TTTEEE:    
ExpBur          :beeebe--eeeeeeeeeeeeeeeeeeeeeebeeee-ebebebbebbebebebeebebeebbbbbbebebbbbbbeebeeeeb-bbbbbbebebeeeeebb:    

queryA      1067:LYGSNA:1072
                :* *  *:
3k6s_C_1    1063:LPGQEA:1068
SecStr          :SSS   :    
ExpBur          :eeeeee:
Protein Model on 3k6s_C_1_M_1 (TEMPLATE: 3k6s )

Input Residue Numbers for Focused Sites
