Protein Model on 5njd_E_1_F_1 (TEMPLATE: 5njd )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:3]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(IL6RA_HUMAN) E 1 (E) polymer(polypeptide(L)) [294 aa] Interleukin-12 subunit beta :IL12B_HUMAN
2 b F 1 (F) polymer(polypeptide(L)) [146 aa] Interleukin-23 subunit alpha :IL23A_HUMAN 126P(Y) 180V(C) 182E(A) 183G(A) 184D(E) 186S 211C(R) 247S 248F(Y) 272D 296E(D) 297E(R) 298F(Y) 299G(Y) 300Q(S) (identity: 20.0 %/27.4 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5njd_E_1 identity=27.4%
queryA        39:PGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAG--------------TVHLLVD--VPPEEPQLSCF: 122
                :**  * ***    **      * *         *   * *  *        * * * *   *                      * *   *     * * :
5njd_E_1      42:PGEMVVLTCDT--PEEDG-ITWTL------DQSSEVLGSGKTLTIQVKEFGDAGQYTCHKGGEVLSHSLLLLHKKEDGIWSTDILKDQKEPKNKTFLRCE: 132
SecStr          :  EEEEEE  S--S  SS- EEEE------TTEEEEEEESSEEEEEE SGGG EEEEEEETTEEEEEEEEEEEEEETTEE   SB     SSTT   EEE:    
ExpBur          :ebeebebebeb--eeeee-bebbb------eeeeeeeeeeeebebebeeeeebbebbbbeeeeeebebebbbbbeeeeeebeebbeeeeeeeeebbbbbe:    

queryA       123:RKSPLSNVVCEW----------------GPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAVPEGDSSFYIVSMCVASSVGSKFSKTQ: 206
                : *       * *                *       *  *  *                 ** * *  *   * *    *  *  *  *         * :
5njd_E_1     133:AKNYSGRFTCWWLTTISTDLTFSVKSSRGSSDPQGVTCGAATLSAERVRGDNKEY----EYSVECQEDS---ACPAAEESLPIEVMVDAVHKLKYENYTS: 225
SecStr          :BSSSSSEEEEEEEES  SSEEEEEEEEE SSS B EEE   EEEEEEE SSSEEE----EEEEEEEESS---  TTS   S EEEEEEEEETTEEEEEEE:    
ExpBur          :bebbebebebebbbebeeebebebebbbbeeeeeebebeeeeeeeeeeeeeeebb----bbbbebebee---eeeeeebeeebebebbbbbeebbbebee:    
Contact         :   b                                                                     b bbb b                    

queryA       207:TFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNS--SFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWS: 304
                : *    *  **** *          *   * *  *  *    *   * *                  *     **             ***       **:
5njd_E_1     226:SFFIRDIIKPDPPKNLQLKPLXXX-RQVEVSWEYPDTWSTPHSYFSLTFCVQVQXXXXXXXXXRVFTDKTSATVI----CRKNASISVRAQDRYYSSSWS: 320
SecStr          :EE GGGGB     EEEEEEE ---- EEEEEEE  TTS S TTTS EEEEEEE --------- EEESSSEEEEE----  TT EEEEEEEESSS     :    
ExpBur          :ebebeebbebeebeebeeeee----eebbbebebbeebbeeeeebbbbbbbeee---------eeebeeeebebe----beeebebbbebbbeeeebeeb:    
Contact         :    b                                   b bb                       b                       bbbbb    

queryA       305:EWS: 307
                :** :
5njd_E_1     321:EWA: 323
SecStr          :  E:    
ExpBur          :eeb:    


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