Protein Model on 7dk3_B_1_C_1
(TEMPLATE: 
7dk3
)Protein Model on 7dk3_B_1_C_1
(TEMPLATE: 7dk3
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SPIKE_SARS2) | B 1 (B) | polymer(polypeptide(L)) [1062 aa] | Spike glycoprotein :SPIKE_SARS2 | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [1048 aa] | Spike glycoprotein :SPIKE_SARS2 | 314Q 317N 357R 380Y 381G 382V 383S 386K 390L 394N 396Y 473Y 475A 477S 478T 486F 487N 489Y 517L 518L 558K 559F 560L 562F 563Q 564Q 565F 566G 567R 568D 569I 570A 571D 588T 589P 592F 613Q 614D 665P 667G 668A 669G 671C 696T 697M 699L 700G 701A 702E 703N 704S 705V 706A 707Y 708S 709N 711S 712I 713A 715P 957Q 961T 965Q 968S 969N 970F 971G 995R 999G 1002Q 1003S 1010Q 1013I 1014R 1017E 1038K 1039R 1040V 1041D 1045K 1046G 1047Y 1068V 1069P 1070A 1072E 1077T 1079P 1089F 1090P 1094V 1107R 1121F 1123S 1124G 1128V 1130I 1141L 1145L (identity: 100.0 %/93.5 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7dk3_B_1 identity=93.5% |
queryA 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113
:******************************************************** *************************************:
7dk3_B_1 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHXXXXXXXKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113
SecStr : SS B EEE SSTT B SS SSEEEEEEEE TT EEEEEEE ------- B EE SSEEEEEEEESS EEEEESSSSTT:
ExpBur :eeeebeeeeebeeeebebebbbbbbbeeeebeeeeeeeeebbbbbebebbebbbee-------eebbbeebebeebbbbbbbbbbbbbbbbbbbeebeee:
queryA 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213
:****************************************************************************************************:
7dk3_B_1 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213
SecStr :S EEEEEE SS EEEEEEEE SS EEE SSS EEEE S S EEEEEEEEE SSB EEEEEEEEEETTEEEEEEEEE BS:
ExpBur :eebbbbbbebebebbebbebeebebbbbbbeebeeeeeeebeeebbeeeeeeeeeeeebeeeebebeeeeeebeebbbbbbbbeeeebebbeeeeebebe:
queryA 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313
:********************************** ***********************************************************:
7dk3_B_1 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSXXXXXXXSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313
SecStr :SS S BEEEEEE EEEEE EEB ------- S B SEEEEEEE EEEEEEEEE TTSSEEEEEESSSSHHHHHHHHHTSSS SEEE:
ExpBur :eebeeeebbbeeeeebebebebeebbbbbbbbee-------eeebbbbebbbbbbebeeeebbbebeeebebeebbbbeeeebbebebeeeeeebeebee:
queryA 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413
:****************************************************************************************************:
7dk3_B_1 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413
SecStr :EEEE EEEE B STTTTS SS BSSS EEEEE SSB SHHHHTT SEEEESSS SSHHHHS SEEEEEEEEEEGGGSTT STT:
ExpBur :eeeeeeeeeeeebbbbeeeeeebebeebbeeeebbbbbebeeeebeebbbebeebeeeeebeeeebeeeeeeebeeebbbebebbbbbbebebeeebbee:
Contact :b b b bbbb b b b b
queryA 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513
:****************************************************************************************************:
7dk3_B_1 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513
SecStr : STIIIII TT EEEEEEE TTTT TT TT EEES SS TT EE SSS TTS BTTEE EEE TTS TTTSEEEEEEE:
ExpBur :eebebbeebbbbbeebebbbbbbebbeebbeeebbeebebbeeeeeebeeeeeeeeeebeeeeeeebeeeeeeebeebbeebebeeeeeeeebbebbbbb:
Contact : b b bb bb b
queryA 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613
:****************************************************************************************************:
7dk3_B_1 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613
SecStr :EEE SSS S SSEEEEEETTEEEEEEEEE TT EE TTSSEEEEE SSS EEEEE SS SEEEEEE TTT EEEEE:
ExpBur :bbeeeeeebebbbeeeeeeeeeeebbebbbbbbeeebebeebeeebeeeeeeeeeeeeeebbbbbeeeeeebebeebeeebbbbbbbbeeebeebbbbee:
Contact : bb bbb bbbbbbbbbb bb b b
queryA 614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713
:******* ************************************ *************************:
7dk3_B_1 614:DVNCTEVXXXXXXXXXXXXXXXXXXXXNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIA: 713
SecStr :T S -------------------- EEE SSEEEESSEE S B SEEEETTEEEEEE ------------ EEEEEEB TTEEE:
ExpBur :eeebeee--------------------eeeebebbbbebbeebeeeeeeebebeeebbbbbee------------eebbbbbeeeeeeeeeeeeeeeeee:
Contact :b b bbb b bb bbbbbbbbbbb bbb
queryA 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813
:****************************************************************************************************:
7dk3_B_1 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813
SecStr :EEEEEEEEEEEEEEE EEEE HHHHHSSS HHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHTT SS SS TT TTTSB TTSSS:
ExpBur :bbeebebebeebbbbbbbebbbbebeebbbeebeebeebbeeeeeebeebeeebeebbeebbebbeebbeebeeebeeeeeeebbebebeebbbeeeeee:
Contact : b
queryA 814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913
:************** ************************************************************:
7dk3_B_1 814:KRSFIEDLLFNKVTXXXXXXXXXXXXXXXXXXXXXXXXXXKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913
SecStr : BHHHHHHHHH -------------------------- SSEEEE SS HHHHHHHHHHHHHHHHHTTTHHHHSS HHHHHHHHHHTTT T:
ExpBur :ebbebbbbbbeebe--------------------------eeebbeeeeeebeeeebbeebbbbbbbbbebbebbeeeeeeebebeebbbebbeebebee:
queryA 914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013
:************************************************************************ **************************:
7dk3_B_1 914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLI:1013
SecStr :HHHHHHHHHHHHHHHHHHHHHHHHHHH SGGGHHHHHHHHHHHHHHHHHHHGGG TTSS S HHHHHTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHH:
ExpBur :ebbeeeeeebbebbeebbeebeeebeeeeeebbebeebeeebeebeeebeeebeeebebeebebeebeeeeeeeebeebbeebbebbbebbeebbeebee:
Contact : b b b bbbb b b bb b b
queryA 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113
:****************************************************************************************************:
7dk3_B_1 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113
SecStr :HHHHHHHHHHHHHHHHHHTTTS STTTS SSEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEES EESSSSEEEESSSEEEE SSSEEEE SSS E:
ExpBur :ebeebeebbeebbebbeebbbeebeeeebbbeeebbbbbbbbbbebbbbbbbbbeeeeeeebebbebbbeeeebbeeeebbbbbeeeebbbbbebbbeee:
Contact :b b bbbb bbb bbb b b b bb b b
queryA 1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS:1147
:**********************************:
7dk3_B_1 1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS:1147
SecStr :E BTTTEEE S TTTSTT EE B THHHHHH :
ExpBur :ebbeeebeeeeebeeeeebeebebeeeeeeeeee:
Contact : b bb b b b b
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[assembly_id:1]
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